Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1727 ATGGGAGCTAAGTTCAAAACTATCTTATTTGAAAAAGTCCTCTTCGCAATAATAATTTACTTCATATTCTCCAAAACAAACACAACCAAAGCCCTTGACACATCATGTGCTTCTCAACCCGACCTCACCATCATTCCCATCTACGGCAAATGCTCCCCATTCAAACCCACACCAGGCCCATGGCCCGACACAATCATCAACATGGCCTCCAAAGACCCAGCCCGCCTCGACTACCTCGCCTCCCTCGTGGCCCGAAAAAAGCCCGTGTCGTCAGCACCCATAGCTTCGGGCCAGGCCTTCAACATAGGTGGCTACGTGGTCCGGGCCCGTCTCGGCACACCTGGCCAACTCATGTTCATGGTCTTCGACACCAGCACTGACGAGGCCTGGGTCCCATGCACCGGCTGCACCAGTTGCCCGTCCACCTACTCTCCCTTCTCCCCCACTGCCTCCGCCACCTACGGCGGCTCCATCACCTGCTCCGCCACAAAATGCTATCAGGCTCGTGGCGCACAAACATGCCCCGGAGGCCCCGGCGCCAGCTCCGCCTGTACCTTCAATCAGTCCTACGGCGGAGCGATGGTCTCCGCCACGCTCGTCCAGGACTCAATCTCTTTGGCGAGAGAAACAATCTCGAATTACGCTTTCGGATGCGTTAATTCTGTTTCTGGCGGGTCGATTCCGTCCCAAGGGCTTTTGGGACTGGGCCGTGGGCCCTTATCTTTTATTTCACAGTCCCTACCGCTCTATAAGGGCGTGTTCTCATACTGTCTTCCAAGTTTCCGATCCTACTATTTTTCCGGGTCGTTGAAACTCGGGCGTTCGGGTCAGCCCAGGAGAATCCAAACGACGCCGCTTTTGCGTAACCCACGCCGGCCCTCGCTTTACTATGTAAATCTCACCGGAGTGAGCGTGGGCCGGGTAAGGGTCCCTGTGCCACGGGAGTTTCTGGTGTTTAACCAGTACACGGGTTCGGGTACAATAATTGATTCGGGTACGGTTATAACCCGGTTCGTGCAGCCGGTTTACAATGCTATCAGGGACGAGTTTAGAAGACAGGTAAAAGGCCCATTTTCAAGTTTAGGTGCATTCGACACTTGTTTTCAAAAGACCTACGAAAAACTGGCACCAATCATCAAACTCCATTTTGAAGGCATGGACCTAAAGTTGCCATATGAGAACAGCCTCATACACAGTAGTTCTGGATCGTTGGCTTGTCTGGCGATGGCGGCTGCACCCAACAACGTGAACTCAGTGTTGAATGTGATCGCCAACTTGCAGCAACAGAATCTTAGAATTCTGTTTGATATAGTTAATAATAAGGTTGGCATAGCCCGTGAGCTTTGTAACTAG 1353 0.5248 MGAKFKTILFEKVLFAIIIYFIFSKTNTTKALDTSCASQPDLTIIPIYGKCSPFKPTPGPWPDTIINMASKDPARLDYLASLVARKKPVSSAPIASGQAFNIGGYVVRARLGTPGQLMFMVFDTSTDEAWVPCTGCTSCPSTYSPFSPTASATYGGSITCSATKCYQARGAQTCPGGPGASSACTFNQSYGGAMVSATLVQDSISLARETISNYAFGCVNSVSGGSIPSQGLLGLGRGPLSFISQSLPLYKGVFSYCLPSFRSYYFSGSLKLGRSGQPRRIQTTPLLRNPRRPSLYYVNLTGVSVGRVRVPVPREFLVFNQYTGSGTIIDSGTVITRFVQPVYNAIRDEFRRQVKGPFSSLGAFDTCFQKTYEKLAPIIKLHFEGMDLKLPYENSLIHSSSGSLACLAMAAAPNNVNSVLNVIANLQQQNLRILFDIVNNKVGIARELCN* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1727 450 Gene3D Acid Proteases 82 272 IPR021109 -
Ahy7g1727 450 Pfam Xylanase inhibitor C-terminal 296 445 IPR032799 -
Ahy7g1727 450 ProSiteProfiles Peptidase family A1 domain profile. 105 445 IPR033121 -
Ahy7g1727 450 Pfam Xylanase inhibitor N-terminal 105 273 IPR032861 -
Ahy7g1727 450 SUPERFAMILY Acid proteases 98 449 IPR021109 -
Ahy7g1727 450 PANTHER ASPARTYL PROTEASES 15 450 IPR001461 GO:0004190|GO:0006508
Ahy7g1727 450 Gene3D Acid Proteases 273 450 IPR021109 -
Ahy7g1727 450 PANTHER ASPARTYL PROTEASE AED3-LIKE 15 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1727 Ahy-Chr7 63471910 63475262 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1727 74 450 Miscellaneous Gene Families AT1G77480 24.396 3.49e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1727 - - aip:107608124 877.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3023 17 130963386 130965088 Ahy7g1727 7 63471910 63475262 hybridization