Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0342 ATGGCAACAAGATACAATCCAAAGAACATTCTGATAACTGGAGCAGCTGGTTTCATTGCATCACATGTATGCAACAGGCTAATAAGAAACTACCCTGATTACAAGGTGGTTGTTCTTGACAAGCTTGATTACTGTTCAAATCTGAAGAACCTGCTTCCATCAAGATGTTCTTCGAATTTCAAGTTCATCAAGGGAGATATATGCAGTGCTGATATTGTTAACTACATTCTTCTCACTGAGTCCATTGATACCATAATGCACTTTGCAGCACAGACTCATGTTGATAACTCCTTTGGCAACAGCTTTCAGTTCACTCAGAACAACATCTATGGAACTCATGTTCTCTTGGAAGCTTGCAAAGTTAGTGGTGGACAAGTTAAGAGGTTCATCCATGTCAGCACAGATGAAGTTTATGGTGAGACAGATGAGGATGCAGTTGTAGGAAACCATGAGGCATGTCAACTTCTACCTACAAATCCATATTCAGCAACAAAAGCTGGTGCTGAAATGCTGGTAATGGCTTATGGTAGATCCTATGGTTTACCTGTTATAACAACAAGAGGGAACAATGTCTATGGCCCTAACCAGTTCCCAGAGAAGCTGATTCCAAAGTTCTTGCTCTTAGCCATGAATGGAAAGCCACTACCAATTCATGGAGATGGATCAAATGTGAGAAGCTATCTGTATTGTGAAGATGTTGCTGAGGCCTTTGAGGTCATTCTCCATAGAGGTGAAGTAGGACATGTTTACAACATTGGTACAAAGAAGGAGAGAAGAGTGATTGATGTTGCAAGGAACATATGCAACTTGTTCTCTTTGGATCCTGATACACAAATCAAGTTTGTTGAGAATAGGCCTTTCAATGATCAAAGGTACTATTTGGATGATCAGAAGTTGAAGAGTTTGGGATGGTTTGAGAGAACAACTTGGGAAGAAGGACTAAGAAAAACAATGGATTGGTATCTTAAGAATCCTGATTGGTGGGGTGATGTTTCTGGTGCTTTGATTCCTCATCCAAGAATGTTAACTATGCCTGGAGTTGACAAGAACAATGGCCAAGATAATGCTTCTAATGTTGTTGTTATGAACAATTCTAATCAGAGCAAAATGGTGGTTCCAAACTCAAGGAACAATATGAAGTTCTTGATCTATGGTGGTGGAGGATGGATTGGAGGACTTCTTGGGAAAGTTTGTGAGAATCAAGGGATACCCTTTGAGTTTGGAAAGGGGAATTTAGAAGATAGGTCACAAATCTTGGTTGATATTGAAACTATTAAGCCAACTCATGTTTTTAATGTTAATGGTGTCATCACTAGTGCATTGAATTTGAAGTGGTTTGAGGCAAACAAAACAGAAACTATTGGTGCTGATGTTGTTGGTGTGCTAACCTTAGCAGATGTCTGCAATGATTATGATCTTCCCATGATGAATTATGTCTTTGGTGGTAACTTTGAAGATAAACCAAATTCTAATGATTCTTTCTACTCTAAAACCCAAGCCAAGGTTGAAGAGCTTTTAAAGGATTATGAAAATGTATGCATTCTCAAAATTCAATTTCCAGTATCCTCTGATCTTAGCAGTCCACAAAACTTCATCACTAAGATGACAAGATCTGATAAAGTGGCTAATGTTGCTGCTAGCATCACTGTTTTGGATGAACTTCTTCCAATTTCAATTGAGATGGCACAAAAGAATTTGAAGGGTGTTTGGGACTTAACCAATCCTGATACTGTGACATGCAATGAGGTTCTTGAGATGTACAAGGATTATATTGATCCTTGTTTGAAGTGGAATAATTTCACACCTAAAGAAGAGGCTCAATTTTCTACTCAATACACCAATGGAGTTGATGCATCAAAATTGAAGAAGGAATTTCCTCAGCTCCTATCTGTTAAAGATTCTTTGATTAAATATGTCTTTGAGCCAAAGACAAAAAGCTTAGTGCATTGA 1950 0.3831 MATRYNPKNILITGAAGFIASHVCNRLIRNYPDYKVVVLDKLDYCSNLKNLLPSRCSSNFKFIKGDICSADIVNYILLTESIDTIMHFAAQTHVDNSFGNSFQFTQNNIYGTHVLLEACKVSGGQVKRFIHVSTDEVYGETDEDAVVGNHEACQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFLLLAMNGKPLPIHGDGSNVRSYLYCEDVAEAFEVILHRGEVGHVYNIGTKKERRVIDVARNICNLFSLDPDTQIKFVENRPFNDQRYYLDDQKLKSLGWFERTTWEEGLRKTMDWYLKNPDWWGDVSGALIPHPRMLTMPGVDKNNGQDNASNVVVMNNSNQSKMVVPNSRNNMKFLIYGGGGWIGGLLGKVCENQGIPFEFGKGNLEDRSQILVDIETIKPTHVFNVNGVITSALNLKWFEANKTETIGADVVGVLTLADVCNDYDLPMMNYVFGGNFEDKPNSNDSFYSKTQAKVEELLKDYENVCILKIQFPVSSDLSSPQNFITKMTRSDKVANVAASITVLDELLPISIEMAQKNLKGVWDLTNPDTVTCNEVLEMYKDYIDPCLKWNNFTPKEEAQFSTQYTNGVDASKLKKEFPQLLSVKDSLIKYVFEPKTKSLVH* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0342 649 Pfam GDP-mannose 4,6 dehydratase 11 317 IPR016040 -
Ahy7g0342 649 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 1 645 - -
Ahy7g0342 649 Gene3D - 370 649 - -
Ahy7g0342 649 Gene3D - 10 315 - -
Ahy7g0342 649 PANTHER TRIFUNCTIONAL UDP-GLUCOSE 4,6-DEHYDRATASE/UDP-4-KETO-6-DEOXY-D-GLUCOSE 3,5-EPIMERASE/UDP-4-KETO-L-RHAMNOSE-REDUCTASE RHM1-LIKE 1 645 - -
Ahy7g0342 649 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 376 596 IPR036291 -
Ahy7g0342 649 Gene3D - 202 324 - -
Ahy7g0342 649 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 334 IPR036291 -
Ahy7g0342 649 CDD dTDP_GD_SDR_e 8 326 IPR005888 GO:0008460|GO:0009225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0342 Ahy-Chr7 2806179 2809746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0342 2 322 Miscellaneous Gene Families AT3G23820 27.697 1.11e-17 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0342 K12450 - gmx:100810341 1062.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0487 17 4719313 4722177 Ahy7g0342 7 2806179 2809746 hybridization