LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy7g0225	ATGTCGAACGAGAACGAACCGGCGAAGCTGCTATTACCGTACCTTCAACGCGCCGATGAGCTGCAAAAGCATGAACCTCTCGTCGCTTATTACTGTCGATTATATGCGATGGAGCGAGGATTAAAGATTCCGCAAAGTGAACGCACCAAGACCACCAATGCTCTGCTTGTTTCGCTCATGAAGCAGCTCGAGAAGGATAAGAAGTCAATCCAGATTGGACCAGAGGATAATCTATATATTGAGGGATTTGCCTTGAATGTATTTGGAAAAGCAGACAAGCAAGATCGTGCTGGAAGAGCAGACTTGAATACAGCAAAAACATTTTATGCTGCTAGCATCTTTTTCGAGATTCTTAATCAATTTGGAGCACTTCAACCTGATCTGGAACAGAAACAGAAATATGCTGCCTGGAAAGCAGCAGATATAAGAAAGGCTGTGAAAGAAGGAAGGAAACCCACAGCTGGCCCACCGGCTGGTGATGATGACCTTTCATTTTTACCGAGTACTCCTAATACTACACATAATGTTGGCACCAATGAAACTACTGCAAGTCCTGGACCAGAATCCGATCCGTCACCTAGTTATCATAACCCTGTTGACTACCATAATCTCCCAAGCGCTCATTCTGCACCTCAATTCCATGATACTGCTAATGACCAGCATTTGCCAAACATTCCACCATCTATGCAGTTTCATGATAGAGTAAACAATAATAAGCATTCTTCCAGTGTTTCTCCATCTTCTCAACCTTACACACCTTTCTATCCTTCTCAAGATTACCATCCTCCTCCTCCTTCCCAAGATTATCATTCTCCTCCACCCTCGCAAGATTACCATCCTCCTCCTCCCCCCCAAGATTATCATCCTCCACCACCTGCCCAAGATTACCATTCTCCCCCACTTGCTAGATCAGATAGCTCTTATTCCGAGCATTACAACCATCAGCAGTACTCACCAGAACACTCACAGCATTTAGGCTCAAACTACCCTTCTCAAGAACCTCCATCTTCGCATTCGTATCCACACTTCCAATCGTACCCAAGTTTTACAGAAAGCAGCCTACCATCAGTCCCTTCGAACTATACTTATATTCAAGGGCCTGATCCTTCATACTCTTCACAGTCTGCTCCTCTTACCACAAGTCATTCACCAATTGCTCAGCATAGTTCTGGGAACAGAAACGGAAATATATCAAACACTCAGACATATCAGTATGACAGTAACTACCAGCCAGCACCTGAGAAAATAGCAGAGGCGCATAAGGCCGCAAGATTTGCTGTGGGGGCACTTGCATTTGATGATGTCTCAGTTGCAGTAGACTACTTGAAGAAATCACTTGAGTTACTGACAAATCCATCAGCTGGTCAATGA	1371	0.4442	MSNENEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQSERTKTTNALLVSLMKQLEKDKKSIQIGPEDNLYIEGFALNVFGKADKQDRAGRADLNTAKTFYAASIFFEILNQFGALQPDLEQKQKYAAWKAADIRKAVKEGRKPTAGPPAGDDDLSFLPSTPNTTHNVGTNETTASPGPESDPSPSYHNPVDYHNLPSAHSAPQFHDTANDQHLPNIPPSMQFHDRVNNNKHSSSVSPSSQPYTPFYPSQDYHPPPPSQDYHSPPPSQDYHPPPPPQDYHPPPPAQDYHSPPLARSDSSYSEHYNHQQYSPEHSQHLGSNYPSQEPPSSHSYPHFQSYPSFTESSLPSVPSNYTYIQGPDPSYSSQSAPLTTSHSPIAQHSSGNRNGNISNTQTYQYDSNYQPAPEKIAEAHKAARFAVGALAFDDVSVAVDYLKKSLELLTNPSAGQ*	457

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy7g0225	456	MobiDBLite	consensus disorder prediction	165	190	-	-
	Ahy7g0225	456	Pfam	Vta1 like	13	148	IPR039431	-
	Ahy7g0225	456	Gene3D	-	4	152	IPR023175	-
	Ahy7g0225	456	MobiDBLite	consensus disorder prediction	147	401	-	-
	Ahy7g0225	456	MobiDBLite	consensus disorder prediction	256	297	-	-
	Ahy7g0225	456	Gene3D	Immunoglobulin FC, subunit C	412	451	-	-
	Ahy7g0225	456	Pfam	Vta1 C-terminal domain	413	450	IPR041212	-
	Ahy7g0225	456	PANTHER	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG	1	320	IPR044538	GO:0032511
	Ahy7g0225	456	PANTHER	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG	274	454	IPR044538	GO:0032511
	Ahy7g0225	456	MobiDBLite	consensus disorder prediction	209	255	-	-
	Ahy7g0225	456	MobiDBLite	consensus disorder prediction	300	401	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy7g0225	Ahy-Chr7	1741311	1743935	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy7g0225	1	118	Glycosyltransferase	AT2G31960	25.984	7.51e-08	53.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy7g0225	K12199		-	gmx:100806599	692.575

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy17g0336	17	3080389	3083013	Ahy7g0225	7	1741311	1743935	hybridization