Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2607 ATGGCTTGGAGGCCTTTATTAACGCAGGTTTCAAGGCGACAATTAGAATTTGGACAGGCAAAACATTTGTTTCTTAGAGGCCATTTTTCCATTAATAAGTTCAGAGATTGTGCAGGGAATAGGCTTTTGCCCACCCAGGAGAGATTCAAGTCCAGCTATGTTGGCGATTTCAACCGTCGAATACGTGATGCAGATGAAGCTGTTGAAATTTCTCATCTGAAAGAACTTTACCATCGAAATGAACCTGAAGCTGTAATTAGGTTATTTGAAAGTCAGCCATCTCTGCATGCTAATCCTTCAGCACTTTCCGAATATATTAAAGCATTAGTTAAAGTTGATAGGCTGGATGAAAGTGAATTATTGAAGACATTGAGAAGAGGTATGCCCAATGCAGTGAGGGAGGAAGAAAGCATAGATGGCTTCTCTTCTCTTAGAAATATGCGGGGGCAAGAAAGTATAGGTGGTTTCTCTACTTTTAGAAATCTGGGAACACCTGCAAGAGAGAGAATTCTTGGGACTGCAAGTTCACCCGTTCATATGGTGGCTACAGAAGCGGCGAGTTTTAAAGATCGACTATGGCGTGCATTTAGGTCCATTGTAGTTGTTTTTTTGTTGATTTCGGGTGCAGGAGCTCTCGTAGAGGATAAAGGAGTTGGTCAAGGGCTTGGTGAACATGAAGGAGTGCTACCCAGCATGGAGTCAAGTACAAGATTTAATGATGTAAAAGGTGTTGACGAGGCAAAGGCAGAGCTGGAAGAAATTGTTCACTACCTCCGGGATCCTAAGCGCTTTACTCGGCTTGGTGGTAAGCTTCCAAAAGGAGTGTTGCTTGTTGGTCCACCTGGAACTGGAAAAACTATGTTGGCTAGAGCTATAGCCGGAGAGGCTGGGGTTCCTTTCTTCTCAAGCAGTGGAAGCGAATTTGATGAGATGTACGTGGGTGTAGGTGCACGAAGGGTCAGGGATCTTTTTTCCGCTGCTAGGAAGCGATCACCTTCTATAATCTTCATTGACGAGATAGATGCTATTGGAGGGAACCGAAGTGCGAAGGACCAAACTTACATGAAGATGACATTAAATCAATTGCTGGTTGAGTTAGATGGATTCAAACAAAATGAAGGCACAATTGTGATTGGAGCAACTAATTTTCCAGAGTCATTGGATAAGGCTTTGGTGAGACCTGGTCGATTTGATCGCCATGTTGTTGTTCCCAATCCAGATGTAGAAGGAAGACGGCAGATTTTGGAGTCGCACATGTCAAAGGTTATGATGGCTGATGATGTTGATTTGATGGTCATTGCTCGAGGAACACCTGGGTTCTCTGGTGCTGACCTTGCAAACTTGGTTAATGTAGGCGCCCTTAAGGCTGCAATGGACGGTGCTAAAGCTGTGACCATGGCCGATTTAGAGTATGCAAAGGACAAGATCATGATGGGAAGTGAACGCAAGACAGCCATCATATCTGAGGAATCGCGAAAGTTGACTGCTTACCATGAGGGTGGCCATGCCCTTGTGGCCATTCACACCGATGGGGCCCTTCCTGTTCACAAGGCGACAATAGTTCCCCGAGGGATGGCCCTCGGCATGGTTACTCAATTACCCGAGAAGGATGAGACCAGCATATCCCGTAAACAGATGCTTGCCCGGCTTGATGTTTGCATGGGAGGCCGGGTAGCAGAAGAGCTCATTTTCGGGGCAAACGAAGTTACTGCTGGCGCGTCGTCCGACCTCAAGCAGGCGACTAAGCTAGCAAGGGAAATGATTACTAAATATGGTATGGGAAAGGAGACTGGACTTGCCACTCACAATTACAATGATGATGGGAGAAGCATGAGCTCAGAGACAAGGCTTCTTATTGAGAAAGAGGTGAAGCATTTCTTGGAGAGAGCTTACAACAATGCAAAAACAATTCTAACCACTCACAACAAGGAACTCCATGCTCTTGCAAATGCTCTTCTTGAACATGAGACCCTTTCAGGAACTCAGATAAGAACACTTCTTGCTCAAGTTAGATCCCAGAAACAGCAGCAGCAGCAGCAGCCGCACATGGTCGAAGTGCAGAGCAGTTCGCCGTCCAGCACAGCAGCTTCTGCTGCTGCCGCCGCAGCTGCTGCGGCTGCTGCTGCCACTGCCGCCGCCAAGTCTCAAGGTGTTCCAGTTGGATCTTAG 2169 0.4657 MAWRPLLTQVSRRQLEFGQAKHLFLRGHFSINKFRDCAGNRLLPTQERFKSSYVGDFNRRIRDADEAVEISHLKELYHRNEPEAVIRLFESQPSLHANPSALSEYIKALVKVDRLDESELLKTLRRGMPNAVREEESIDGFSSLRNMRGQESIGGFSTFRNLGTPARERILGTASSPVHMVATEAASFKDRLWRAFRSIVVVFLLISGAGALVEDKGVGQGLGEHEGVLPSMESSTRFNDVKGVDEAKAELEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSSSGSEFDEMYVGVGARRVRDLFSAARKRSPSIIFIDEIDAIGGNRSAKDQTYMKMTLNQLLVELDGFKQNEGTIVIGATNFPESLDKALVRPGRFDRHVVVPNPDVEGRRQILESHMSKVMMADDVDLMVIARGTPGFSGADLANLVNVGALKAAMDGAKAVTMADLEYAKDKIMMGSERKTAIISEESRKLTAYHEGGHALVAIHTDGALPVHKATIVPRGMALGMVTQLPEKDETSISRKQMLARLDVCMGGRVAEELIFGANEVTAGASSDLKQATKLAREMITKYGMGKETGLATHNYNDDGRSMSSETRLLIEKEVKHFLERAYNNAKTILTTHNKELHALANALLEHETLSGTQIRTLLAQVRSQKQQQQQQPHMVEVQSSSPSSTAASAAAAAAAAAAAATAAAKSQGVPVGS* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2607 722 CDD AAA 272 404 - -
Ahy6g2607 722 ProSitePatterns AAA-protein family signature. 375 393 IPR003960 GO:0005524|GO:0016887
Ahy6g2607 722 SUPERFAMILY FtsH protease domain-like 486 670 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Ahy6g2607 722 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 4, MITOCHONDRIAL-LIKE 43 701 - -
Ahy6g2607 722 Hamap ATP-dependent zinc metalloprotease FtsH [ftsH]. 4 671 IPR005936 GO:0004176|GO:0004222|GO:0016020
Ahy6g2607 722 Gene3D - 406 479 - -
Ahy6g2607 722 Pfam ATPase family associated with various cellular activities (AAA) 275 404 IPR003959 GO:0005524|GO:0016887
Ahy6g2607 722 TIGRFAM FtsH_fam: ATP-dependent metallopeptidase HflB 229 667 IPR005936 GO:0004176|GO:0004222|GO:0016020
Ahy6g2607 722 MobiDBLite consensus disorder prediction 673 697 - -
Ahy6g2607 722 MobiDBLite consensus disorder prediction 673 701 - -
Ahy6g2607 722 SMART AAA_5 271 407 IPR003593 -
Ahy6g2607 722 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 235 475 IPR027417 -
Ahy6g2607 722 Gene3D - 224 405 IPR027417 -
Ahy6g2607 722 Pfam AAA+ lid domain 427 470 IPR041569 -
Ahy6g2607 722 Pfam Peptidase family M41 486 665 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Ahy6g2607 722 PANTHER METALLOPROTEASE M41 FTSH 43 701 - -
Ahy6g2607 722 Gene3D Peptidase M41 480 679 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2607 Ahy-Chr6 111327965 111332994 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2607 65 667 Miscellaneous Gene Families AT5G53170 50.081 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2607 K08955 - jre:109020493 1039.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3311 16 150055445 150060534 Ahy6g2607 6 111327965 111332994 hybridization