Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2483 ATGACAACAAGCATGGTCACATTTTTCACAACCCTTTTGGTTATACTCATGAGTTTCCAAACTGAATCATTGCAACATCCAATTCCATCGCCATATTATTCAGGATCAGTTAAAGCTGGATATTGGCCTTCAGGTAATTCTCTCTCACCTTCTTCCATTGACACAAGATACTTCACACACATCTACTATGCCTTTGTAGAGCCAGAACCAAACACCTTCAACCTCATAATCACATCCTCCGACCAAAACTACATACCTCAATTCATCAATGGTTTAAGCAGCCGGAACCCTCCCGTCAAGACCATATTATCCATCGGAGGGGGTTCCAGCAATGCTACCTTATTCTCTTTGATGGCTAGCACGGTAAAAAACCGTGCAGCCTTCATAAACTCCACAATCCAAGTGGCCCGTCAATATGATTTTGACGGACTAGACTTGGATTGGGAGTTTCCTCAAAATGAGCAAGACATGGCAAACCTTGCTTTGTTGTTCAAAGAATGGCACCAGGCTGTGGTTTTCGAAGCCAAGGTTCATAGAAGGCCACGTTTGCTGTTGACCGCAGCTGTGTACTATGCTCACACAATAGTACTTATTGGGCCTGGCCCAAGGTCTTATCCGGCCCAAGCTATTAAAGATTACTTAGATTGGGCTAGCCCTATGTGCTTTGATTACCATGGTGCATGGTCCAATTTCACTGGCTACAATAATGCTTTATTTGATCCTAAGTCCAATATAAGCACCCAATTTGGTCTCGGATCTTGGATCCAGTCCGGCGTCCCGCCCTCAAAGCTGGTTTTCGGGTTACCGCTTTACGGGCGAGCGTGGAAGCTCCAAGATCCGAAAGTTCATGGGGACGGAGCGCCCGCAGTTGGAGCAGCCGATGGCACGGATGGTACTATGAATTATAATGATATCTTGGAATTTAATAAAAAGAATAAGGCTACAGTTGTGTTTGATAGGTCAGCTGTGTCTTATTACACTTATGCTGGCACTACTTGGATGAGCTATGATGATGCACCCTCCATGACAAGGAAGGTTCAATATGCTAAGTCTTTGGGATTGAAAGGATATTTCTTTTGGCAAGTTGGAGGCGATAAGAATTGGACTATGTCAAGACAAGCTTCAAGTTCGTGGGGACACTGA 1143 0.4453 MTTSMVTFFTTLLVILMSFQTESLQHPIPSPYYSGSVKAGYWPSGNSLSPSSIDTRYFTHIYYAFVEPEPNTFNLIITSSDQNYIPQFINGLSSRNPPVKTILSIGGGSSNATLFSLMASTVKNRAAFINSTIQVARQYDFDGLDLDWEFPQNEQDMANLALLFKEWHQAVVFEAKVHRRPRLLLTAAVYYAHTIVLIGPGPRSYPAQAIKDYLDWASPMCFDYHGAWSNFTGYNNALFDPKSNISTQFGLGSWIQSGVPPSKLVFGLPLYGRAWKLQDPKVHGDGAPAVGAADGTDGTMNYNDILEFNKKNKATVVFDRSAVSYYTYAGTTWMSYDDAPSMTRKVQYAKSLGLKGYFFWQVGGDKNWTMSRQASSSWGH* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2483 380 SMART 2g34 36 365 IPR011583 GO:0008061
Ahy6g2483 380 Pfam Glycosyl hydrolases family 18 39 365 IPR001223 GO:0005975
Ahy6g2483 380 PANTHER CHITINASE 25 379 - -
Ahy6g2483 380 SUPERFAMILY (Trans)glycosidases 36 376 IPR017853 -
Ahy6g2483 380 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 141 149 IPR001579 GO:0004553|GO:0005975
Ahy6g2483 380 Gene3D - 270 336 IPR029070 -
Ahy6g2483 380 PANTHER CLASS V CHITINASE CHIT5A 25 379 - -
Ahy6g2483 380 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 36 380 IPR001223 GO:0005975
Ahy6g2483 380 SUPERFAMILY Chitinase insertion domain 271 336 IPR029070 -
Ahy6g2483 380 Gene3D Glycosidases 51 366 - -
Ahy6g2483 380 CDD GH18_plant_chitinase_class_V 37 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2483 Ahy-Chr6 109678963 109680491 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2483 37 378 Glycoside Hydrolase AT4G19810 43.605 2.56e-94 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2483 K01183 - gmx:100787511 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3178 16 148145071 148146711 Ahy6g2483 6 109678963 109680491 hybridization