Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2448 ATGGATACACTGCCAACGACGTCGTCTAAGAGCGAACGGAGAAGTGGTAGATCGAAGGCTGCTCAGACCTCTAAGTCTTCTCTCGTCATGGCTTTCTTTTCTTGCGTCGCTTGGCTTTACGTTGCCGGCAGGTTGTGGCAGGATGCAGAGAATCGCAATTTGCTTGCTACTCTTTTAAAGAAGAATTCAGCACAGAGGTCCAAGGTTATTACTGTGGAAGATAAGCTAATGATTCTAGGGTGCAAGGATCTGGAGAGGAGGATTGTGGAAGCTGAGATGGATTTGACATTGGCAAAGAGCCAAGGGTTCCTAAAAGGCCAGTCGCAGAAAAGTGGCTCTTCTGATCCTAAGCTTCTTGCTGTTATTGGTGTCTACACTGGATTTGGAAGTAAATTGAGAAGAAATGTTGCCCGAGGGTCATGGATGCCCAGAGGCGATGCTTTGAAAAAACTTGAAGAAAGAGGAGTGGTCATACGTTTTGTAATTGGTCGGAGTGCTAATCGAGGTGATAGCTTAGATCGCAATATTGATGAAGAAAATCGCTCAACAAAGGATTTCTTGATTCTTGAAGGTCATGAGGAAGCTCAAGAAGAGTTGCCTAAGAAAGCAAAGATCTTCTTTAGTACTGCAGTTCAGAACTGGGATGCTGACTTTTATGTGAAAGTTGATGACAGTATTGACATTGATCTGGAGGGATTAATTGACCTTCTTAACCGCCGCCGCGGTCAGGATGGGGCATATATTGGATGCATGAAATCTGGAGAAGTGATATCAGAAGAGGGCAAGGCATGGTACGAACCTGAATGGTGGAAATTTGGGGATGAAAAGTCGTATTTTCGACATGCAGCTGGTTCACTTGTTATAATTTCAAAGAATTTGGCGCAGTATATTAACATAAACAGTGCATCTTTGAAGACTTATGCCTATGACGATACATCGTTGGGATCTTGGATGATGGGTGTCCAAGCAACGTATATAGACGATATTCGCCTTTGCTGCAGTAGCATCAGTCAAGATAAGGTTTGTTCCTTGGCATGA 1038 0.4374 MDTLPTTSSKSERRSGRSKAAQTSKSSLVMAFFSCVAWLYVAGRLWQDAENRNLLATLLKKNSAQRSKVITVEDKLMILGCKDLERRIVEAEMDLTLAKSQGFLKGQSQKSGSSDPKLLAVIGVYTGFGSKLRRNVARGSWMPRGDALKKLEERGVVIRFVIGRSANRGDSLDRNIDEENRSTKDFLILEGHEEAQEELPKKAKIFFSTAVQNWDADFYVKVDDSIDIDLEGLIDLLNRRRGQDGAYIGCMKSGEVISEEGKAWYEPEWWKFGDEKSYFRHAAGSLVIISKNLAQYININSASLKTYAYDDTSLGSWMMGVQATYIDDIRLCCSSISQDKVCSLA* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2448 345 Coils Coil 81 101 - -
Ahy6g2448 345 Pfam Domain of unknown function (DUF4094) 24 101 IPR025298 -
Ahy6g2448 345 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 3 341 IPR002659 GO:0006486|GO:0016020|GO:0016758
Ahy6g2448 345 MobiDBLite consensus disorder prediction 1 20 - -
Ahy6g2448 345 Pfam Galactosyltransferase 133 325 IPR002659 GO:0006486|GO:0016020|GO:0016758
Ahy6g2448 345 Gene3D - 133 338 - -
Ahy6g2448 345 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE HPGT3 3 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2448 Ahy-Chr6 109051407 109056462 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2448 77 345 Glycosyltransferase AT2G25300 80.741 4.91e-163 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2448 K20854 - gmx:100816327 610.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3152 16 147677630 147682514 Ahy6g2448 6 109051407 109056462 hybridization