Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2343 ATGCAAATGCAAATAAGTTCCTTGCGCACTCAAACTTTCTGGCATTCACCCGCTCAAAAGTATGGCCGCCACATCATGGCATTGCCAAGAGCGGCCGCCATTGCGGCACCGCCTCCCTTGAAATCCAAGAAAACCCACTCCATGGCACCAGAAAAGATCGAGATTTTCAAGTCACTGGAAAACTGGGCCTCAGAATGTGTGCTACCGATGCTGAAGCCAGTAGAACAATGTTGGCAGCCACAGAATTTGGTGCCAGACTCATCGCAACCCTTAGATGAATTCACCGATGAGGTGAAGAATCTCCGGCAGCGCACTGCGGAGATTCCGGATGATTACTTTGTTGTGTTGGTGGGTGATATGATCACGGAGGATGCTCTACCTACTTATCAGAGCATGATTAACAACCTAGATGGGGTTGGGGACGAGATCGAGTCAAGCCCAAACCCGTGGGCCGTGTGGACTCGAGCTTGGACGGCTGAAGAGAATAGACATGGGGATTTGCTCAGAACTTATTTGTATCTTTCGGGTCGGGTTGATATGTTGATGATCGAAAAAACAGTGCAATACCTCATTGGAGCTGGCATGGATCCAGGAACCGAAAACAATCCTTATTTGGGGTTTGTGTACACCTCATTTCAAGAACGAGCCACCTTCGTGTCACATGGAAACACAGCCCGGCTAGCAAAGGAGGGTGGTGATTCTGTGCTGGCTCGCATATGTGGGACCATAGCTGCAGATGAAAAGCGCCACGAAAACGCATATCAAAAGATTGTTGAGAAGCTTCTAGAAGTGGATCCCAGTGATGCAGTTGTTGCAATAGGAGACATGATGCAGAAAAAGATCACAATGCCAGCACACTTGATGTACGATGGGAGTGACCCTAAGTTGTTCGAGCACTTCTCCGCCGTGGCGCAGCGATTGGGCGTGTACACGGCCAATGATTATGCTGATATCTTGGAGTTCCTTGTTGGACGGTGGAGATTGGAGAAGCTAGAAGGATTGACGGCTGAGGGAAAACGAGCACAAGATTATGTGTGTGGGTTATCTCAGAGGATCAGGAGGCTGCAAGAGCGTGCTGATGAGCGAGCACGCAACATGAAGAAGTCGCATAGCGTGAAGTTCAGCTGGATCTTTAACAAGGAAGTGCTTTTGTGA 1155 0.4909 MQMQISSLRTQTFWHSPAQKYGRHIMALPRAAAIAAPPPLKSKKTHSMAPEKIEIFKSLENWASECVLPMLKPVEQCWQPQNLVPDSSQPLDEFTDEVKNLRQRTAEIPDDYFVVLVGDMITEDALPTYQSMINNLDGVGDEIESSPNPWAVWTRAWTAEENRHGDLLRTYLYLSGRVDMLMIEKTVQYLIGAGMDPGTENNPYLGFVYTSFQERATFVSHGNTARLAKEGGDSVLARICGTIAADEKRHENAYQKIVEKLLEVDPSDAVVAIGDMMQKKITMPAHLMYDGSDPKLFEHFSAVAQRLGVYTANDYADILEFLVGRWRLEKLEGLTAEGKRAQDYVCGLSQRIRRLQERADERARNMKKSHSVKFSWIFNKEVLL* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2343 384 Gene3D Ribonucleotide Reductase, subunit A 37 384 IPR012348 GO:0016491
Ahy6g2343 384 SUPERFAMILY Ferritin-like 41 383 IPR009078 -
Ahy6g2343 384 Pfam Fatty acid desaturase 51 378 IPR005067 GO:0006631|GO:0045300
Ahy6g2343 384 CDD Acyl_ACP_Desat 51 359 IPR005067 GO:0006631|GO:0045300
Ahy6g2343 384 ProSitePatterns Fatty acid desaturases family 2 signature. 301 320 IPR005803 GO:0006633|GO:0016491
Ahy6g2343 384 PANTHER STEAROYL-[ACYL-CARRIER-PROTEIN] 9-DESATURASE 6, CHLOROPLASTIC 26 383 - -
Ahy6g2343 384 PIRSF Dlt9_acylACP_des 5 384 IPR005067 GO:0006631|GO:0045300
Ahy6g2343 384 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 26 383 IPR005067 GO:0006631|GO:0045300
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2343 Ahy-Chr6 107037512 107040002 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2343 30 382 Acyl Lipid Metabolism Gene Families AT1G43800 76.685 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2343 K03921 - gmx:100037478 606.29