Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2064 ATGGCTGACCCAAAAAGTCATTACTCCATGGCCATCCAACCCCAACAACCACCCTCCTCAGTTACCGGAAAACACAGGATTCTCATCACTGCCCCTAACTTCCTCAGGCTCTTATCCATTCTATTCTCCGCGGCTTCCATCGCCGTCATGGTCACCTCCAACCAAACGGTTTCCCTCTTCTCCTTGTCCCTTGAGGCTCACTTTTACTACTCTTCAGCTTTTAAATACTTTGTTGCTGCAAATTCTGTAGTGTGTCTCTTCACTCTGTTGACACTCATACTCAACTTTCTGCTGGGACAACAATTACTAATGCGGAGGGACTATTATTTCTATCTATTCACACATGATATGGTGGTGACGGTGCTATTGATGTCTGGATGCGCCGCAGCAACAGCAGTTGGCTATGTGGGTCAGTACGGGCAGGATCATATGGGTTGGCAGCCGCTGTGTGATCATGTTGCCAAGTTCTGCAGATCCACTTTGGTTTCTATTTTGCTCTCTTATTTCTCCTTCTTTTCCTATTTCGCCCTCTCTCTCTTGGAGGCATATTCTTCCATCTCTTCTCCTTTCCCTTCTCCACACTAA 585 0.4667 MADPKSHYSMAIQPQQPPSSVTGKHRILITAPNFLRLLSILFSAASIAVMVTSNQTVSLFSLSLEAHFYYSSAFKYFVAANSVVCLFTLLTLILNFLLGQQLLMRRDYYFYLFTHDMVVTVLLMSGCAAATAVGYVGQYGQDHMGWQPLCDHVAKFCRSTLVSILLSYFSFFSYFALSLLEAYSSISSPFPSPH* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2064 194 PANTHER CASP-LIKE PROTEIN 1F2 9 184 - -
Ahy6g2064 194 Pfam Casparian strip membrane protein domain 33 172 IPR006702 -
Ahy6g2064 194 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 35 183 IPR006459 -
Ahy6g2064 194 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 9 184 - -
Ahy6g2064 194 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2064 Ahy-Chr6 100180859 100182802 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2064 35 178 Miscellaneous Gene Families AT1G79780 26.415 2.05e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2064 - - aip:107647272 270.011