Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2044 ATGAAGACACCACTCCAATCTGTTTTCAGAACGATAACCGTTCGTGCTTACTCATCACCACCACCACAACCAACAAAATGGACCAAAAACAAGAACCTTACAACAATGTTCCACAGGTACGTGGACAAGACCAGCGTCACTTCTTGGAACTCCATCATTGCCGACCTCGCCCGAAGCGGCGACTCCCTCGAGGCCCTCCGCGCCTTCTCCTCCATGCGTAAGCTTTCCCTCATTCCCAATCGCAACACCTTTCCTTGCGCCATCAAATCCTGTTCTTCGCTCTTCGACCTTTGCGCCGGCAAACAGACCCATCAACAGGCTTTCGTCTTTGGCTTTGAATCGGATCTCTTTGTTTCCTCAGCTCTTATTGATATGTACTCTAAGTGTGGCCATTTGGAAGACGCCCGAAACCTGTTCGACGAAATTCCCCAAAGGAATGTGGTGTCTTGGACTTCAATTATTGCCGGCCATGTCCAAAATGGTTGCGCTACTGAGGGCATTCGCTTGTTTAAGGAGCTTTTAGTTGAAGAGAGTGAGAATGTGGGGTGTGTTCAGGAGGAGGAGGAGGATGGTTTTGTGGATCCGATAGTTGTAGGTTCGGTGCTTTCGGCTTGTTCTTGGGTGCAGCAGAAGAGAACTACTGAAGGGGTTCATGGTTTTGTGATTAAGAGGGGGTTCGATGGGTGTTTAGGGGTTGGGAACACGTTGATGGATGCTTATGCAAAGTGTGGGGAGATGGGTGTGTCAAGGAAGGTGTTTGATGGGATGATTGAGAAAGATGCTTACTCTTGGAACTCTATGATTGCTGAATATGCACAAAATGGATTGTCAGCTGAGGCATTCAATGTTTTCAGTGATATGGTGAAGAGTAGCAAGGTCAGTTATAATGCTGTGACATTGTCGGCAGTGTTGTTAGCCTGTGCAAATTCAGGAGCTCTGCAGGTTGGGAAGTGCATACATGGTCAGGTTATAAAGATGGATTTGGAGGATAATGTTTTTGTAGGTACCTCTGTAGTAGACATGTACTGTAAATGTGGGAGAGTTGAGTTGGCTAGAAAGGGGTTTGATCGCGTGAAAGAGAAGAATGTTAAGTCATGGACCGCTATGGTTGCTGGCTATGGAATGCATGGTTGCGCAAAAGATGCTTTGGAAGTCTTCTACAAGATGATAAGGTCTGGAGTCAAACCGAACTACATCACTTTTGTGTCAGTTTTGGCTGCTTGCAGCCATGCTGGTCTGTTGGAAGAAGGATGGAATTGGTTTAACAGAATGAATCACGAATTTAATGTTGAGCCTGGAATTGAGCATTATTCGTGCATGGTTGATCTTCTTGGCCGTGCTGGTTATCTTAATGAGGCTTATGGATTGATAAAGAAAATGAAGGTGAGACCTGATTTTATAATATGGGGTTCCCTTCTTGGGGCTTGTAGGATTCACAAAAATTTGGAACTAGGGGAGATTTCTGCTAGAAAACTATTTGAGTTAGACCCAAGTAATTGTGGGTACTACGTACTACTCTCGAATATATATGCTGATGCTGGACGGTGGGATGATGTCGAGAGGATGAGAATATTGATGAAAAATCATGGATTGCTTAAAACACCTGGATTCAGCATAGTTGAACTTAAAGGTAGAATACATGTATTTTTAGTTGGTGATAAAGAGCATCCTCAACACGTTAAGATTTACGAGTATTTGGACAAATTAAATGTTAAGCTGCAAGGACTGGGCTATGTGCCTAACGTAACATCAGTGCTTCATGACATTGATGATGAAGAAAAAGGAATGGTTCTAAGAGTTCACAGTGAGAAACTTGCTGTTGCCTTTGGAATCATGAATTCAGTTCCTTGTGCAACTATCCAGATCATAAAAAATCTTAGGATTTGTGGTGACTGCCATGCTGTAATTAAATTGATTTCCAAGGTGGAAAACCGAAAAATTATTGTCAGAGACTCAAAGCGATTTCATCATTTTAAGGATGGATTCTGTTCTTGTGGGGACTATTGGTGA 2010 0.4338 MKTPLQSVFRTITVRAYSSPPPQPTKWTKNKNLTTMFHRYVDKTSVTSWNSIIADLARSGDSLEALRAFSSMRKLSLIPNRNTFPCAIKSCSSLFDLCAGKQTHQQAFVFGFESDLFVSSALIDMYSKCGHLEDARNLFDEIPQRNVVSWTSIIAGHVQNGCATEGIRLFKELLVEESENVGCVQEEEEDGFVDPIVVGSVLSACSWVQQKRTTEGVHGFVIKRGFDGCLGVGNTLMDAYAKCGEMGVSRKVFDGMIEKDAYSWNSMIAEYAQNGLSAEAFNVFSDMVKSSKVSYNAVTLSAVLLACANSGALQVGKCIHGQVIKMDLEDNVFVGTSVVDMYCKCGRVELARKGFDRVKEKNVKSWTAMVAGYGMHGCAKDALEVFYKMIRSGVKPNYITFVSVLAACSHAGLLEEGWNWFNRMNHEFNVEPGIEHYSCMVDLLGRAGYLNEAYGLIKKMKVRPDFIIWGSLLGACRIHKNLELGEISARKLFELDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGFSIVELKGRIHVFLVGDKEHPQHVKIYEYLDKLNVKLQGLGYVPNVTSVLHDIDDEEKGMVLRVHSEKLAVAFGIMNSVPCATIQIIKNLRICGDCHAVIKLISKVENRKIIVRDSKRFHHFKDGFCSCGDYW* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2044 669 Pfam PPR repeat family 361 408 IPR002885 -
Ahy6g2044 669 Pfam PPR repeat family 259 308 IPR002885 -
Ahy6g2044 669 TIGRFAM PPR: pentatricopeptide repeat domain 262 294 IPR002885 -
Ahy6g2044 669 TIGRFAM PPR: pentatricopeptide repeat domain 365 397 IPR002885 -
Ahy6g2044 669 TIGRFAM PPR: pentatricopeptide repeat domain 399 432 IPR002885 -
Ahy6g2044 669 TIGRFAM PPR: pentatricopeptide repeat domain 234 260 IPR002885 -
Ahy6g2044 669 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN DOT4, CHLOROPLASTIC 35 603 - -
Ahy6g2044 669 Gene3D Tetratricopeptide repeat domain 314 428 IPR011990 GO:0005515
Ahy6g2044 669 Gene3D Tetratricopeptide repeat domain 429 541 IPR011990 GO:0005515
Ahy6g2044 669 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 115 149 IPR002885 -
Ahy6g2044 669 Pfam DYW family of nucleic acid deaminases 577 669 IPR032867 GO:0008270
Ahy6g2044 669 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 260 294 IPR002885 -
Ahy6g2044 669 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 362 396 IPR002885 -
Ahy6g2044 669 Pfam PPR repeat 120 147 IPR002885 -
Ahy6g2044 669 Pfam PPR repeat 436 462 IPR002885 -
Ahy6g2044 669 Pfam PPR repeat 148 174 IPR002885 -
Ahy6g2044 669 Pfam PPR repeat 48 75 IPR002885 -
Ahy6g2044 669 Gene3D Tetratricopeptide repeat domain 187 313 IPR011990 GO:0005515
Ahy6g2044 669 Gene3D Tetratricopeptide repeat domain 46 186 IPR011990 GO:0005515
Ahy6g2044 669 PANTHER OS01G0913400 PROTEIN-RELATED 35 603 - -
Ahy6g2044 669 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 45 79 IPR002885 -
Ahy6g2044 669 Pfam E motif 479 541 IPR046848 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2044 Ahy-Chr6 99450977 99453734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2044 27 669 Glycoside Hydrolase AT3G49170 38.110 3.20e-157 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2044 - - lang:109338154 1098.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2385 16 130498533 130501342 Ahy6g2044 6 99450977 99453734 hybridization