LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy6g2042	ATGAGCAGCTGGAGAAGCCTTCTTCTGCGAATCGGCGACAAGAGTCCCGAATACGGTGCCGCCGGCGACTTCAAGGACCACATTGAAACATGTTTTGGCGCCATTCGCAGAGAGCTCGACCACTCCCAAACCGAGATTTTGGAGTTCCTTTTGGCATGTGCTGAGCAATTGCCTCACAAGATTCCGTTGTATGGAACCCTGATTGGCTTGATTAACTTAGAAAATGAGGACTTCGTTAAAAAACTAGTGGACAAAACTCGGACTAAATTTCAGGATGCGTTAAATTCTGGAGACTGCAATGGGGTTCGTATCCTAATGCGGCTTATGACTGTCATGATGTGCAGTAAGGTTCTTCAACTAAGCTCTTTGGTTGGCATCTTTGATACGTTTTTATCATCAGCTGCTACAATAGTTGATGAGGAAAAAGGAAATCCCTTGTGGCAGCCTTGTGCAGACTTTTATATAACTTGTATTTTATCATGCCTCCCATGGGGTGGAGCAGAACTTGTTGAGCAAGTTCCTGAAGAGATTGAGAGACTGATGGTTAGTGTTGAAGCTTATTTGAGCATCAGAAGGCGTGACTCTGACACTGGTTTATTCTTTTTTGAAAAAGATGATGCAAACGAGAGAGGTTCCGGTGATAAGGATTTTGTAGAAGACTTATATGACAGAATACAAGCTTTATCTAGTAATGGATGGAAAGTTGAAAGTGTTCCAAGACCACATCTATCATTTGAAGCTCAGCTTGTTGCTGGGAAGTCCCATGAATTTGGGACAGTGAGCTGCCTTAACATACCAAGCCCACCTTCAGTACCTTCTGGCATATCTAATGGTAAACAAAAGCATGAAGCAGAGTTAAAATATCCCCAAAGGATACACCGGCTTAACATATTTCCCCCCAGTAAAACTGAGGATCTGCAGCCTATTGATCGATTTGTTATGGAAGAATATCTCCTGGATGTGCTTCTGTTCTTCAATGGCTGTCGAAAGGAATGTGCTTCCTTTATGGTTGGCTTGCCAGTGCCCTTCAGATATGAGTACCTCATGGCTGAGACAATATTCTCTCAGTTGCTGATGCTACCTCAACCACCTTTCAAGCCAATATACTACACACTGGTTATTATTGACCTTTGTAAGGCTCTTCCTGGAGCATTTCCTGCAGTTGTTGCTGGAGCAGTTCGTGCTCTCTTTGAGAAGATTGCTGATTTGGATATGGAGTGTCGAACACGTCTCATCCTTTGGTTTTCACATCATTTGTCGAACTTTCAGTTCATCTGGCCATGGGAAGAGTGGGCTTATGTCTTAGACCTCCCAAAGTGGGCCCCGCAACGTGTGTTTGTTCAGGAGGTTTTGGAGCGAGAAGTTCGCTTATCTTACTGGGACAAAGTTAAGCAGAGCGTTGAAAATGCAGCTGGTTTAGAAGAATTACTTCCTCCAAAAGGTGGACCAAACTTAACTTTGGGGGCAGACGGTACAGAGAACAATGAAAATGTGCTCTCTGGAGAGCTTAACAACATGGTTAAAGGAAAGGCACCTGTTCGTGAAATAATCTCGTGGATTGATGAAAGCGTACTTCCAAATAATGGTCTAGAAGTTACACTAAGAGTGGTTGTACAAACTCTTCTCAATATTGGATCTAAAAGTTTCACACATTTGATAACCGTCTTAGAGAGATATGGTCAAGTTTTTGCAAAACTATGTCCTGACCAGGATAAGCAAGTCATGCTGATTGCTGAAGTGGGTTCATTTTGGAAGAGTAACACCCAAATGACAGCAATAGCAATTGACAGGATGATGGGTTATCGACTTGTATCAAATTTGGCCATCGTGAGATGGGTTTTCTCCTTAGAAAATATTGAGCAATTTCATACATCAGATCGTCCATGGGAGGTTCTTCGAAATGCAGTAAGCAAGACATATAATCGTATTTCTGATTTAAGGAAAGAGATATTATCTCTTAAAAGGAATATTTTATCAGCTGAAGAAGCTGCAAAGCAAGCAAAAGAAGAGTTAGATGCTGCAGAGTCGAAACTGACACTTGTAGATGGTGAACCAGTTCTTGGTGAAAATCCTGCTAGGTTGAATAGATTGAAGTCGCAAGCTGCAAAAGCAAAGGAGGAGGTGGTTTCTCTTCAAGAATCTTTTGAAGCTAAGGAAGCTCTTCTTGTCCGAGCAATTGAAGAAAATGAGGCATTATTTCTAATGTTGTACAAAAGCTTCTCAAATGTGTTGGTGGAGCGCCTTCCTGAAGGATCTAAAGCTAGATCACTGCACGAATTGAAGGCTGCAGAAGTTGATGTGATGGCAGTGGATCCTCAAGAACCATCAACAATGGAACTAGATAATGAGAATCAACAACCCCAAAACAGTCAGTCAAATGGCGGGAAGAAAAGTGGTGCTTACAATGTAGGCGAAAAGGAGCAATGGTGTATCACCACTTTGGGTTATGTGAAGGCCTTTTCCAGGCAGTATGCGGCTGAGATATGGCCTCATATTGAGAAGCTGGATGCTGAGGTATTGACAGAAGAAGCACCTCCTCTTTTTCGATCGGCTGTTTATTCTGGTCTTAGAAGACCAATTAACGAGGCTTGA	2592	0.4248	MSSWRSLLLRIGDKSPEYGAAGDFKDHIETCFGAIRRELDHSQTEILEFLLACAEQLPHKIPLYGTLIGLINLENEDFVKKLVDKTRTKFQDALNSGDCNGVRILMRLMTVMMCSKVLQLSSLVGIFDTFLSSAATIVDEEKGNPLWQPCADFYITCILSCLPWGGAELVEQVPEEIERLMVSVEAYLSIRRRDSDTGLFFFEKDDANERGSGDKDFVEDLYDRIQALSSNGWKVESVPRPHLSFEAQLVAGKSHEFGTVSCLNIPSPPSVPSGISNGKQKHEAELKYPQRIHRLNIFPPSKTEDLQPIDRFVMEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLMLPQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRTRLILWFSHHLSNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSVENAAGLEELLPPKGGPNLTLGADGTENNENVLSGELNNMVKGKAPVREIISWIDESVLPNNGLEVTLRVVVQTLLNIGSKSFTHLITVLERYGQVFAKLCPDQDKQVMLIAEVGSFWKSNTQMTAIAIDRMMGYRLVSNLAIVRWVFSLENIEQFHTSDRPWEVLRNAVSKTYNRISDLRKEILSLKRNILSAEEAAKQAKEELDAAESKLTLVDGEPVLGENPARLNRLKSQAAKAKEEVVSLQESFEAKEALLVRAIEENEALFLMLYKSFSNVLVERLPEGSKARSLHELKAAEVDVMAVDPQEPSTMELDNENQQPQNSQSNGGKKSGAYNVGEKEQWCITTLGYVKAFSRQYAAEIWPHIEKLDAEVLTEEAPPLFRSAVYSGLRRPINEA*	864

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy6g2042	863	Gene3D	-	298	481	-	-
	Ahy6g2042	863	Pfam	MIF4G like	500	826	IPR015174	GO:0016070
	Ahy6g2042	863	Pfam	MIF4G like	344	467	IPR015172	GO:0016070
	Ahy6g2042	863	SUPERFAMILY	ARM repeat	2	296	IPR016024	-
	Ahy6g2042	863	PANTHER	CAP BINDING PROTEIN	2	860	IPR027159	GO:0000339\|GO:0005846\|GO:0006406
	Ahy6g2042	863	SMART	if4_15	1	229	IPR003890	GO:0003723\|GO:0005515
	Ahy6g2042	863	MobiDBLite	consensus disorder prediction	776	800	-	-
	Ahy6g2042	863	SUPERFAMILY	ARM repeat	294	478	IPR016024	-
	Ahy6g2042	863	Gene3D	-	492	853	-	-
	Ahy6g2042	863	Coils	Coil	694	721	-	-
	Ahy6g2042	863	SUPERFAMILY	ARM repeat	478	849	IPR016024	-
	Ahy6g2042	863	MobiDBLite	consensus disorder prediction	777	798	-	-
	Ahy6g2042	863	Gene3D	-	3	269	-	-
	Ahy6g2042	863	Coils	Coil	636	684	-	-
	Ahy6g2042	863	Pfam	MIF4G domain	22	192	IPR003890	GO:0003723\|GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy6g2042	Ahy-Chr6	99389880	99406007	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy6g2042	K12882		-	gmx:100811738	1498.8

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy16g2383	16	130451623	130468267	Ahy6g2042	6	99389880	99406007	hybridization