Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1983 ATGGGTTCAAGGCGTGTAGGTGTATTGACCCTAAGTCTTGTTATTGTAGCGTCACTGGTGTCCGCTGCAATGTGCGGCGTTCCCAGAAGACCCGTTGATGTTCAATTTGGCCGTAACTATGTTCCCACTTGGGCCTTTGACCACATCAAATACTTCAATGGCGGTTCTGAGATTCAGCTCCATCTTGATAAATATACTGGCACTGGATTCCAGTCCAAAGGTTCATACTTGTTTGGTCACTTCAGCATGTACATCAAGATGGTTCCTGGTGATTCCGCTGGCACTGTAACCGCTTTCTATTTGTCTTCACAAACTGCGGAGCATGATGAAATAGACTTTGAGTTCTTGGGGAACAGAACAGGACAACCTTACATATTGCAAACCAATGTGTTCACCGGAGGTAAAGGTGATAGAGAACAGAGAATCTATCTCTGGTTTGATCCCACCAAAGAATACCACAGATATTCAGTTCTATGGAACTTGTATCAAGTTGTGTTCTTTGTGGATGATGTACCAATTAGGGTGTTCAAGAACTGCAAGGACTTGGGTGTGAAATTCCCATTTGACCAACCAATGAAAATCTACAACAGCTTATGGAACGCAGATGATTGGGCCACAAGGGGTGGTTTGGAGAAAACAGATTGGTCGAAAGCACCATTCATAGCTTCCTACAAAGGCTTCCACATTGATGGTTGTGAAGCCTCCGTTGAAGCCAAGTTCTGTTCCACTCAAGGTAAGAGATGGTGGGACCAACAAGAATTCAGAGACCTTGATGCTCTTCAATGGAGGAGGCTTAGATGGGTTCGCCAGAAGTTCACTATTTACAACTATTGCAATGATAGAAAGCGTTACCCTACTCTTCCTCCTGAATGCTCTAGAGACCGTGACATTTAA 894 0.4418 MGSRRVGVLTLSLVIVASLVSAAMCGVPRRPVDVQFGRNYVPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMYIKMVPGDSAGTVTAFYLSSQTAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEYHRYSVLWNLYQVVFFVDDVPIRVFKNCKDLGVKFPFDQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVEAKFCSTQGKRWWDQQEFRDLDALQWRRLRWVRQKFTIYNYCNDRKRYPTLPPECSRDRDI* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1983 297 Pfam Glycosyl hydrolases family 16 37 217 IPR000757 GO:0004553|GO:0005975
Ahy6g1983 297 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 12 295 - -
Ahy6g1983 297 PIRSF EndGlu_transf 1 296 IPR016455 GO:0010411|GO:0016762|GO:0042546
Ahy6g1983 297 CDD GH16_XET 31 291 IPR016455 GO:0010411|GO:0016762|GO:0042546
Ahy6g1983 297 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 295 IPR013320 -
Ahy6g1983 297 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 12 295 IPR044791 GO:0004553
Ahy6g1983 297 ProSitePatterns Glycosyl hydrolases family 16 active sites. 110 120 IPR008263 GO:0004553|GO:0005975
Ahy6g1983 297 Gene3D - 21 297 - -
Ahy6g1983 297 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 22 224 IPR000757 GO:0004553|GO:0005975
Ahy6g1983 297 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 244 291 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1983 Ahy-Chr6 97352693 97356082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1983 6 297 Glycoside Hydrolase AT5G13870 77.133 7.54e-179 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1983 K08235 - gmx:547775 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2310 16 127800601 127803979 Ahy6g1983 6 97352693 97356082 hybridization