Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1928 ATGCAGTCGCACCTTCTGACGGGACCCATCCGCGGTAGCGCTACGGCGTTTCCCTCCGTCGCGGACGCATCTCCCTTCTTCTCTGCCACTCCTCCCATCTCCATCCGCCGGCGTCTCCGCTCGTGCTGCCCATTCATAGCCGCATCATCGTCATCGTCTTCCTCCTCTTCGTCGTCGGCAGCAGCATTCAACGCCACTGGTAGTCAGAGCTTATACGCGGTGCTCGGCGTCCCTATCACCGCCACTGCCGCTGAGATCAAACGCGCTTACCGGCTCCTCGCCCGCAAGTATCACCCTGATGTTAGCAAAGATTTACAAGCAGCTGAATTGTTCAAGAGCATCCGTCATGCATATGAAGTACTATCGAATGAAGTAACAAGAATTCAGTATGATAGAGAACTTCAATACAGTCACAAGCCTTACAGAGAAAAATGGAGTCACAGCACTGAGTTTGAAGACCAAGCAAGAATCTATAGGTGGGCCAACCTGAGGAGGAAAATGTATAATGAAAGATACACAGAGCATTACAATGTCGATGAGGGTTACTATACCACTGAAACAGACGAGGAGGAAGATGAAGGAGACTTAGACGAAGAGAGGGGCTCCTTTATTGAAGTGCTTAGATCAGCATTCGTGATTATATTTTTGTTCCAGACGATAGGGTCCCGCCTTTCTCTCACGTTTAGCAGTGTGATGGCATTGCTGGATGAGAAGTTAGATAATGGATATAAAATTGGTTATATAATAGCATGGATAATGGGCGGAAGGGGTGGCATATTGCTAACAATGTTCTTGTCATTTGCAAGTTGGGTTTGCGGGAAAACCAGTAGTAGTGCAGTGGTACTGGTGATTGTAGCCATGTGGGTCGGCTCCTACCTCTCAAGGTACGCTCCACTTCCTCAAGGTGCTCTGTTAACGCTACTCTATATGTCCATTAAGCTGCAATCTGATCATATATAA 960 0.4802 MQSHLLTGPIRGSATAFPSVADASPFFSATPPISIRRRLRSCCPFIAASSSSSSSSSSSAAAFNATGSQSLYAVLGVPITATAAEIKRAYRLLARKYHPDVSKDLQAAELFKSIRHAYEVLSNEVTRIQYDRELQYSHKPYREKWSHSTEFEDQARIYRWANLRRKMYNERYTEHYNVDEGYYTTETDEEEDEGDLDEERGSFIEVLRSAFVIIFLFQTIGSRLSLTFSSVMALLDEKLDNGYKIGYIIAWIMGGRGGILLTMFLSFASWVCGKTSSSAVVLVIVAMWVGSYLSRYAPLPQGALLTLLYMSIKLQSDHI* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1928 319 PRINTS DnaJ domain signature 90 105 IPR001623 -
Ahy6g1928 319 PRINTS DnaJ domain signature 72 90 IPR001623 -
Ahy6g1928 319 PRINTS DnaJ domain signature 106 126 IPR001623 -
Ahy6g1928 319 SUPERFAMILY Chaperone J-domain 66 139 IPR036869 -
Ahy6g1928 319 ProSiteProfiles dnaJ domain profile. 70 134 IPR001623 -
Ahy6g1928 319 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 43 310 - -
Ahy6g1928 319 CDD DnaJ 72 123 IPR001623 -
Ahy6g1928 319 Pfam DnaJ domain 71 131 IPR001623 -
Ahy6g1928 319 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 43 310 - -
Ahy6g1928 319 SMART dnaj_3 69 126 IPR001623 -
Ahy6g1928 319 ProSitePatterns Nt-dnaJ domain signature. 111 130 IPR018253 -
Ahy6g1928 319 Gene3D DnaJ domain 67 180 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1928 Ahy-Chr6 94412499 94416928 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1928 44 135 Miscellaneous Gene Families AT5G49580 33.684 3.15e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1928 - - adu:107494507 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2256 16 125195035 125199200 Ahy6g1928 6 94412499 94416928 hybridization