Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1897 ATGGAAATAGCTGTTTCTCCACAAACACAGAAGCAGAATTTGCCAACAGGTGGTCGCAAAACTTCAGCTGCCGGATCCCAGAAAGATCTCTGGCTTGTTGTGCGAGAAGGATCGGTAAATGAATTAGAGACGGTCTTGACATTATTGAAGAAGAGTGGGGGTAATATCAATGTGCGGAACTCCTTTGGGCTGACTCCTCTTCATCTTGCAATTTGGAGAAATCACATTCCCATTGTCAGGAGGCTTCTTGCAGCTGGTGCAGATCCTGATGCTCGAGATGGCGAATCAGGATGGGGTAGCCTTCATAGGGCGCTACATTTTGGTCATCTTGCTGTGGCAAGTGTCCTTCTACAGCATGGTGCTTCTATTACACTGGAGGATTCAAGATCTCGAGTACCTGTAGATCTTCTATCTGGTCCTGTGTTACAGGTTTCTGGAAATGATCGCAAGTCAGTGGCTACTGAGGTCTTTAGTTGGGGAAGCGGTGCAAATTATCAGCTTGGAACTGGAAATGCTCACATTCAAAAGTTACCTTGCAAAGTTGATTCACTTAATGGTTCATTCATAAAGCTGATCTCTGCAGCAAAGTTCCACAGTGTGGCACTTACTGCGCGTGGAGAAGTTTATACTTGGGGATTTGGAAGAGGGGGCCGTCTAGGGCACCCTGATTTTGACATACACAGTGGTCAAGCTGCTGTCATCACTCCCCGCCAGGTGACTACTGGTCTGGGTTCCCGCAGAGTGATGGCAATCGCTGCAGCTAAGCATCATACTGTTATTGCTACTGAGGGTGGGGAAGTGTTCACTTGGGGATCCAATAGAGAGGGACAGCTGGGATACACTTCTGTTGATACACAACCAACACCTCGGAGAGTGAGTGCTCTAAGGTCAAAAATTGTTGCTGTTGCTGCAGCAAACAAGCACACAGCTGTAGTTTCCGATTTAGGTGAAGTTTTTACCTGGGGTTCAAATAGAGAGGGCCAGCTTGGTTATGGAACCTCAAACTCAGCATCTAATTACACCCCACATGTGGTTGAATCCTTGAAGGGAAAGACTTTAACCAAGGTTTCTGCTGCAAAATATCACACAGTTGTATTAGGATCTGACGGAGAGGTGTACACTTGGGGTTATCGACTAGTTACTCCAAAACGTGTAGTGATTTCTAGGAACTTGAAAAAGAGTGGGAGCACTCCTTTAAAGTTTCATCGAATGGAACGACTTCAGGTAGTTTCTATAGCTGCGGGAATGGTACACAGCATGGCACTTACAGATGACGGTGCATTATTTTATTGGGTCTCATCTGATCCCGATCTCAGATCCCAACAGCTATATTCTATGTGCGGAAGAAATATGGTGAGCATATCTGCTGGAAAGTACTGGACTGCTGCAGTTACGGGTACTGGTGATGTTTACCTGTGGGATGGGAAGAAAAGTAAGGATAACCCACTTGTTGCAACTCGGTTGCATGGAGTAAAGAAGGCTACTTCGGTTTCTGTTGGTGAAACACATTTACTAATAGTGGCTATGCTGTACCATCCTGAATATCCTCTCACCGGTGTTGAGGACTCGCAAAAACCCAAGTTAAATAATAGGGATGATATGGATGAGTTAAATGAAGACATTTTATTTGATGACATGGAATCAAATAATATGGTATCCAGTGTACAAAATGATACTTTTGGGCAGAAATCTGTACCTAGCTTAAAAAGCCTTTGTGAAAAAGTAGCAGCAGAATGTTTAGTGGAGCCACGAAATGCCATACAACTGCTGGAGATTGCCGATTCTCTTGGGGCAGATGAATTGAGAAAGTATTGTGAGGAGATTGTGATGCGCAACCTTGATTTTATATTCACAGTTTCATCGCATGCTGTTGCAAGCACAGCACCAGATATTCTGGCTAACCTTGAGAGGTTGTTGGACCAGAGATCTTCTGAGCCTTGGACACACCGTCGACTCCCAACTCCTACTGCAACCTTCCCTGCCATCATTAACAGTGAAGAGGATGATAGTGAGATAGAGTTTCAAAGGACTCGTGATAAACCCATGAAAATGAATGTGTTGAAATTGGAGAAAGATGAAAGAGGAGATTCCTTTCTACAGCCCAAGGATGACCCCAATCTAGAAACCTCCAAGGTAATTCGGGCAATAAGAAAGAAGCTGCAGCAGATTGAGATGCTTGAAGCTAAGCAATCTAGTGGACATTTCCTCGATGACCAGCAGATCTTAAAGATCCAATCCAAGTCTTCCCTCGAGAGCTCGCTTGCAGAACTAGGTATTTCTGTTGAGACTTTGCAAAATAAGGAATCATCTTCTCCGTCACCATTGCCAGAAGGCAAAGGTAGTAAAAAGGGTAAAGTATCCAAAAAACAGAGGAGAAAGAGCAATAAATCAAGTGTCATCCAAGCAGAGGTAGAATCTTTGTATTCTGCAAGTGAAGTGATTACTGAATCTGTGAAGGATTTGTTGGAAGCTGACATCATGGTGGCTCCTAAGTCTAAGGTGGGAGAGGTTGCTGAAAAAACCACAACCGACCAAGGTGCAACTGCAAAAGATCTAGACTTGATAGTGCAGAAGAAAGATGGTATAGAGTTGCTGCAAGGCAAGGGACAAACACCAAAAGTTTCTAAGAAGAAGAATAAGAAGGGTGGGCTATCAATGTTTTTGAGTGGAGCCCTTGATGATGTTCCAGAGGAGGTGAACCCTCCTCCTACACCGACGCCAAGGAACGAGGGTCCTGCATGGGGTGGGGCCAAGTTCACCAAGGGTTCTGCTTCACTTCGTGATATCCAGGATGAACAGAGCAAAATAAAGGGAAACCAGCTATCTATGACTAAATCTAAGGTTGAAGATCTTTCTGATTTTGGCAGTAGCGGAAAAGTGAAGTTGAGTTCATTTCTTCCTTCTAGTCCAATACCTGTTGTCCCTGCTGCCCCAACTCGTGGTTCACATGCATCTGATGCCGACATAAGTACTCCTCCGTGGGTTGCTTCAGGAACCCCTCCTCAACTTCGGCCATCATTCAGGGACATCCAGATGCAACAGGGAAAGAAACACCAAAGCGTTTCCCACAGTCCTAAGACTAGCACAGCTGGATTCACCATTGCAACAGGTCAAGGCTCACCATCGGAGTCGACCTTGGTGAGCCGCTGGTTCAAGCCTGAAGTGGACACACCATCCTCAATTCGTTCCATTCAGATTGAAGAAAAGGCCATGAAGGATCTCAAGCGCTTCTACAGTAGTGTGAAGATAGTAAGGAAGCAATCTTAA 3267 0.45 MEIAVSPQTQKQNLPTGGRKTSAAGSQKDLWLVVREGSVNELETVLTLLKKSGGNINVRNSFGLTPLHLAIWRNHIPIVRRLLAAGADPDARDGESGWGSLHRALHFGHLAVASVLLQHGASITLEDSRSRVPVDLLSGPVLQVSGNDRKSVATEVFSWGSGANYQLGTGNAHIQKLPCKVDSLNGSFIKLISAAKFHSVALTARGEVYTWGFGRGGRLGHPDFDIHSGQAAVITPRQVTTGLGSRRVMAIAAAKHHTVIATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSALRSKIVAVAAANKHTAVVSDLGEVFTWGSNREGQLGYGTSNSASNYTPHVVESLKGKTLTKVSAAKYHTVVLGSDGEVYTWGYRLVTPKRVVISRNLKKSGSTPLKFHRMERLQVVSIAAGMVHSMALTDDGALFYWVSSDPDLRSQQLYSMCGRNMVSISAGKYWTAAVTGTGDVYLWDGKKSKDNPLVATRLHGVKKATSVSVGETHLLIVAMLYHPEYPLTGVEDSQKPKLNNRDDMDELNEDILFDDMESNNMVSSVQNDTFGQKSVPSLKSLCEKVAAECLVEPRNAIQLLEIADSLGADELRKYCEEIVMRNLDFIFTVSSHAVASTAPDILANLERLLDQRSSEPWTHRRLPTPTATFPAIINSEEDDSEIEFQRTRDKPMKMNVLKLEKDERGDSFLQPKDDPNLETSKVIRAIRKKLQQIEMLEAKQSSGHFLDDQQILKIQSKSSLESSLAELGISVETLQNKESSSPSPLPEGKGSKKGKVSKKQRRKSNKSSVIQAEVESLYSASEVITESVKDLLEADIMVAPKSKVGEVAEKTTTDQGATAKDLDLIVQKKDGIELLQGKGQTPKVSKKKNKKGGLSMFLSGALDDVPEEVNPPPTPTPRNEGPAWGGAKFTKGSASLRDIQDEQSKIKGNQLSMTKSKVEDLSDFGSSGKVKLSSFLPSSPIPVVPAAPTRGSHASDADISTPPWVASGTPPQLRPSFRDIQMQQGKKHQSVSHSPKTSTAGFTIATGQGSPSESTLVSRWFKPEVDTPSSIRSIQIEEKAMKDLKRFYSSVKIVRKQS* 1089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1897 1088 Gene3D - 19 120 IPR036770 -
Ahy6g1897 1088 ProSiteProfiles Ankyrin repeat region circular profile. 62 93 - -
Ahy6g1897 1088 MobiDBLite consensus disorder prediction 764 798 - -
Ahy6g1897 1088 MobiDBLite consensus disorder prediction 1004 1046 - -
Ahy6g1897 1088 SUPERFAMILY RCC1/BLIP-II 398 507 IPR009091 -
Ahy6g1897 1088 MobiDBLite consensus disorder prediction 1 23 - -
Ahy6g1897 1088 ProSiteProfiles Ankyrin repeat region circular profile. 96 127 - -
Ahy6g1897 1088 PRINTS Chromosome condensation regulator RCC1 signature 415 433 IPR000408 -
Ahy6g1897 1088 PRINTS Chromosome condensation regulator RCC1 signature 189 202 IPR000408 -
Ahy6g1897 1088 PRINTS Chromosome condensation regulator RCC1 signature 318 332 IPR000408 -
Ahy6g1897 1088 PRINTS Chromosome condensation regulator RCC1 signature 155 171 IPR000408 -
Ahy6g1897 1088 PRINTS Chromosome condensation regulator RCC1 signature 302 318 IPR000408 -
Ahy6g1897 1088 PRINTS Chromosome condensation regulator RCC1 signature 208 224 IPR000408 -
Ahy6g1897 1088 PRINTS Chromosome condensation regulator RCC1 signature 265 281 IPR000408 -
Ahy6g1897 1088 SUPERFAMILY Ankyrin repeat 40 136 IPR036770 -
Ahy6g1897 1088 MobiDBLite consensus disorder prediction 965 1046 - -
Ahy6g1897 1088 ProSiteProfiles Ankyrin repeat profile. 62 94 IPR002110 GO:0005515
Ahy6g1897 1088 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 206 264 IPR000408 -
Ahy6g1897 1088 Gene3D - 121 383 IPR009091 -
Ahy6g1897 1088 Gene3D - 384 509 IPR009091 -
Ahy6g1897 1088 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 265 315 IPR000408 -
Ahy6g1897 1088 PANTHER ANKYRIN REPEAT FAMILY PROTEIN / REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN 1 1087 - -
Ahy6g1897 1088 Pfam Ankyrin repeats (3 copies) 42 127 IPR002110 GO:0005515
Ahy6g1897 1088 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 154 205 IPR000408 -
Ahy6g1897 1088 SUPERFAMILY RCC1/BLIP-II 119 431 IPR009091 -
Ahy6g1897 1088 SMART ANK_2a 96 125 IPR002110 GO:0005515
Ahy6g1897 1088 SMART ANK_2a 25 58 IPR002110 GO:0005515
Ahy6g1897 1088 SMART ANK_2a 62 91 IPR002110 GO:0005515
Ahy6g1897 1088 MobiDBLite consensus disorder prediction 890 920 - -
Ahy6g1897 1088 ProSiteProfiles Ankyrin repeat profile. 96 128 IPR002110 GO:0005515
Ahy6g1897 1088 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 370 425 IPR000408 -
Ahy6g1897 1088 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 1 1087 - -
Ahy6g1897 1088 Pfam Regulator of chromosome condensation (RCC1) repeat 265 312 IPR000408 -
Ahy6g1897 1088 Pfam Regulator of chromosome condensation (RCC1) repeat 155 202 IPR000408 -
Ahy6g1897 1088 Pfam Regulator of chromosome condensation (RCC1) repeat 206 260 IPR000408 -
Ahy6g1897 1088 Pfam Regulator of chromosome condensation (RCC1) repeat 316 366 IPR000408 -
Ahy6g1897 1088 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 316 369 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1897 Ahy-Chr6 93023417 93031789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1897 35 136 Acyl Lipid Metabolism Gene Families AT5G53470 38.235 8.63e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1897 K24810 - gmx:100800604 1690.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2223 16 123510217 123518644 Ahy6g1897 6 93023417 93031789 hybridization