Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1882 ATGGACAGGCTCATAAAATTAGACCCATCAAACACAATCTCAATAAGAATTGAACCAAATCAAAAGTGCCATGGTCATGTCACCCTATGCAACGTCATGCACACCATGCCAGTGGCTTTCAACCTCCAACCACAAATAAAATGTCGCTACACAGTGAAGCCACATTCAGGAATCATATCTCCATTATCTACACTCACCGTGGAAATATCCTACAATCTCCCACAAGGATCGACGCTGCCGGACTCTTTCCCTCGCTCCAAAGACACTTTCCTCCTCCACAGTTGTGTGGTCCCTGGCGCAGCCATCAATGAACCTTCCTCCATGGTTGATTGTGTCCCAAGCGAGTGGTTCTCGGCGAAAAAGAAGCAAGTCTTCGTGGATACCGGCATCAAGATCGTGTTTCTTGGATCCACAATTCTGGTTAAGCTCATTGGAGATGATCATGGTTCCATGGATGACATAAGAGAAGTTCTAGAACGGAGCGATCCCTCGTGGAAAGCGGTTGATTCGATCGACTCGAACGGCGAAACGTTGCTCCATTTGGCGATTTCGCGGAAGAGAGCGGATGTTGTTCAGTTGCTACTAGAATTTGAGGCTAACTTAGAGGCGCGAAACGGTTCTGGATCAACGCCACTAGAGGCTGCAGCATCTTCAGGTGCAGCCTTAATAGCTGAGCTTCTATTAGCTCACAAGGCCAACATAGAAAGACAAGAAACTTCGACATTTGGACCCATCCACGTCGCTGCTAAACAAGGACACTGCGAAGTTTTGAGGCTCTTGTTACTCAAAGGTGCAAGAGTGGACTCGCTCACAAAAGATGGCAACACAGCGTTACACCTTGCGGTTGAAGAAAATAAAATAGAATGCGTTAAGCTCTTACTAGCAAACGGTGCCAGAACCGACATTCGCAACGCCGGCAAAGGCGACACCGTCTTACACATAGCAGCATCCACCGGGGATCATAACATGGTCGAACTCTTGCTACGAAACGGTGTGAACAAGTATGTTAGAAATGATTCATCAAAAGCTGCATATGATGTTGCAGCAGAGAAAGGACACTCTAGAATCTTCGATGCGCTGAGGCTCGGCGACGATTTGTGCATTGCTGCAAGGAAAGGAGAAGTGAGATCAATACAAAAGTTGCTTGAGAAGGGTGCGTTTGTCAATGGTAGGGACCAGAATGGGTGGACTCCGTTGCACAGGGCTTGTTTCAAAGGGAGGATCGACGCAGTGCACGTGCTTTTGGAGAAAGGGATTGATTTGAATGCAGAGGATGAAGAAGGGTACACTGCTTTGCACTGTGCTGTTGAATGTGGAAATGCTGATGTGGCAGAGGTTTTGGTGAAGAAAGGTGCTGATGTTGAAGCCAGGAGTAAGAAGGGTATCACTGCTTTGCAGGTGGCCAAGGCGCTTCGCTACGTTGGGATCACAAGAATTCTTGTCAATGGTGGTGCTAGTACTTTGGATCATCAAATGGTGGTGCCAGATTCCGGTGCAGTGGTTCCAATTAAGAGTAAAATTGATGCTAAGTGGAAAATGATGAACAAGAAGAACAAGAAGAAGGAGGACGGTGGCGGTGGCTTTGATCGTGGTTCAACTACTCCGGCTATACCTATGGTTGGTTCATGA 1629 0.4727 MDRLIKLDPSNTISIRIEPNQKCHGHVTLCNVMHTMPVAFNLQPQIKCRYTVKPHSGIISPLSTLTVEISYNLPQGSTLPDSFPRSKDTFLLHSCVVPGAAINEPSSMVDCVPSEWFSAKKKQVFVDTGIKIVFLGSTILVKLIGDDHGSMDDIREVLERSDPSWKAVDSIDSNGETLLHLAISRKRADVVQLLLEFEANLEARNGSGSTPLEAAASSGAALIAELLLAHKANIERQETSTFGPIHVAAKQGHCEVLRLLLLKGARVDSLTKDGNTALHLAVEENKIECVKLLLANGARTDIRNAGKGDTVLHIAASTGDHNMVELLLRNGVNKYVRNDSSKAAYDVAAEKGHSRIFDALRLGDDLCIAARKGEVRSIQKLLEKGAFVNGRDQNGWTPLHRACFKGRIDAVHVLLEKGIDLNAEDEEGYTALHCAVECGNADVAEVLVKKGADVEARSKKGITALQVAKALRYVGITRILVNGGASTLDHQMVVPDSGAVVPIKSKIDAKWKMMNKKNKKKEDGGGGFDRGSTTPAIPMVGS* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1882 542 Pfam Ankyrin repeats (3 copies) 162 237 IPR002110 GO:0005515
Ahy6g1882 542 Pfam Ankyrin repeats (3 copies) 366 457 IPR002110 GO:0005515
Ahy6g1882 542 Pfam Ankyrin repeats (3 copies) 244 303 IPR002110 GO:0005515
Ahy6g1882 542 Gene3D - 147 248 IPR036770 -
Ahy6g1882 542 ProSiteProfiles Ankyrin repeat profile. 307 339 IPR002110 GO:0005515
Ahy6g1882 542 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATED 1 532 - -
Ahy6g1882 542 ProSiteProfiles Ankyrin repeat region circular profile. 394 426 - -
Ahy6g1882 542 ProSiteProfiles Major sperm protein (MSP) domain profile. 4 135 IPR000535 -
Ahy6g1882 542 ProSiteProfiles Ankyrin repeat profile. 207 239 IPR002110 GO:0005515
Ahy6g1882 542 ProSiteProfiles Ankyrin repeat region circular profile. 427 459 - -
Ahy6g1882 542 ProSiteProfiles Ankyrin repeat profile. 394 426 IPR002110 GO:0005515
Ahy6g1882 542 Pfam MSP (Major sperm protein) domain 5 110 IPR000535 -
Ahy6g1882 542 MobiDBLite consensus disorder prediction 516 542 - -
Ahy6g1882 542 PRINTS Ankyrin repeat signature 443 457 IPR002110 GO:0005515
Ahy6g1882 542 PRINTS Ankyrin repeat signature 395 410 IPR002110 GO:0005515
Ahy6g1882 542 Gene3D - 365 522 IPR036770 -
Ahy6g1882 542 ProSiteProfiles Ankyrin repeat profile. 427 459 IPR002110 GO:0005515
Ahy6g1882 542 Pfam Ankyrin repeat 308 333 IPR002110 GO:0005515
Ahy6g1882 542 ProSiteProfiles Ankyrin repeat region circular profile. 307 333 - -
Ahy6g1882 542 ProSiteProfiles Ankyrin repeat region circular profile. 174 205 - -
Ahy6g1882 542 ProSiteProfiles Ankyrin repeat region circular profile. 240 268 - -
Ahy6g1882 542 ProSiteProfiles Ankyrin repeat region circular profile. 207 235 - -
Ahy6g1882 542 ProSiteProfiles Ankyrin repeat profile. 174 206 IPR002110 GO:0005515
Ahy6g1882 542 SUPERFAMILY PapD-like 2 138 IPR008962 -
Ahy6g1882 542 SMART ANK_2a 427 456 IPR002110 GO:0005515
Ahy6g1882 542 SMART ANK_2a 460 490 IPR002110 GO:0005515
Ahy6g1882 542 SMART ANK_2a 394 423 IPR002110 GO:0005515
Ahy6g1882 542 SMART ANK_2a 174 203 IPR002110 GO:0005515
Ahy6g1882 542 SMART ANK_2a 307 336 IPR002110 GO:0005515
Ahy6g1882 542 SMART ANK_2a 361 390 IPR002110 GO:0005515
Ahy6g1882 542 SMART ANK_2a 240 269 IPR002110 GO:0005515
Ahy6g1882 542 SMART ANK_2a 207 236 IPR002110 GO:0005515
Ahy6g1882 542 SMART ANK_2a 273 302 IPR002110 GO:0005515
Ahy6g1882 542 Gene3D - 249 362 IPR036770 -
Ahy6g1882 542 SUPERFAMILY Ankyrin repeat 168 487 IPR036770 -
Ahy6g1882 542 PANTHER ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 1-LIKE 1 532 - -
Ahy6g1882 542 ProSiteProfiles Ankyrin repeat profile. 240 272 IPR002110 GO:0005515
Ahy6g1882 542 Gene3D Immunoglobulins 1 135 IPR013783 -
Ahy6g1882 542 ProSiteProfiles Ankyrin repeat profile. 273 305 IPR002110 GO:0005515
Ahy6g1882 542 ProSiteProfiles Ankyrin repeat region circular profile. 273 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1882 Ahy-Chr6 92396174 92400822 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1882 307 468 Miscellaneous Gene Families AT2G31820 34.225 8.50e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1882 - - ahf:112754810 993.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2193 16 121958129 121961299 Ahy6g1882 6 92396174 92400822 hybridization