Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1867 ATGAACGTCGACCGCTACCTAAAGGAGCTCTCCGGCTCTTCCCAGCGAATCCCGACGGAGCAGAGCTTCCACCATTTCTACCTCAACTTCGACGAATTCAAGCGCCCGATCGACGAAATCGCACGTCGCTCGCAGTCGATGCTGGAGAGCATCGGCGTCACCACGCATGCATGGAACACCGGCGTGGATTTCCCGTCCGACATCGACGATGCTTACGAGTGGGTGGTTGACATGAACGATGAGCTCTTGGAATGGTTTGACGAGTCAGTGAGCGAGGTTCGGAAGGCGAGGGAGGAGGACGAGGAGTTCGAGGAGGTGGAGCTGGAGAACGGGTTCGGGTTGGTTCGAGTCAAGAAGGAGGGAGGTGGTGTTGGGAAGAAGAAGGTGGAAGCAGCGGGGACTACGGAAACGACGAAGCCGAAGGTGTCGTTTCACTTAGCCACGGTTAGGAAGCCTCAGGATGTGTACGACATTGTCGTTAACAACACCAACGTGCCGTTTGAGCATATTTGGTTGGAGAAGAGTGAGGATGATCAGAGGTTCATTCATCCTTTGGAGAAACACTCTTATTTGGAGTTTGTTGATAAAAATCTTGAGGGTTTAGTGCCAATGAAGCCTCCTGCAATGGAATGCACTCCTTTCAAGCTAGTGGAGGACGTCAAAGGATTGAAGGAATTGGCTGCGAAGCTGCGTGCTGCTGATGAATTTGCGGTGGATTTGGAACATAATCAATATCGTTCATTCCAAGGTTTGACTTGCTTGATGCAAATCTCAACCAGGACTGAGGATTTTATTGTAGATACTTTAAAGCTCCGTGTCCATGTTGGGCCTTATCTGCGTGAAGTCTTTAAGGACCCTACAAAGAAGAAGGTCTTGCATGGAGCAGATCGAGATATTGTGTGGTTGCAACGGGATTTTGGAATATATGTTTGTAATATGTTTGACACGGGCCAGGCTTCTAGGGTGTTAAAATTGGAGAGATTTAGTTTGCAATATCTTTTACTACACTTGTGTGGGGTTACTGCAAACAAAGAATACCAGAATGCAGATTGGAGACAACGCCCTCTTCCTGATGTTATGATAAGATATGGCAGAGAAGATACACACTATCTGCTGTATATATATGACCAACTGAGAATCAAGTTATTTGCTTTGTCCAAGGAATCTGAAAGTTCTGAAAATCCTCTGGTGGAGGTTTACAAGCGTAGTTATGATGTCTGCATGCAACTATATGAGAAAGAGCTTCTAACAGAAGACTCGTATCTTCATATATATGGGTTGCTGGGGGCTGGTTTTAATGCTCAGCAGCTTGCTGTTGTTTCAGGGCTTAATGAATGGCGGGACATTTTGGCTCGTTCAGAAGATGAGAGTACTGGCTTTATTTTACCAAATAAAGTACTTCTTGAAATAGCAAAGCAGATGCCTGTTACTATAAGCGGTCTTCGGCGATTGACATCATCAAAGCTCCCATATGTTGATCACAATCTTGATGTCATTGTCAACATTGTCAGACATGCCATTCAAAATGCTGCTCCTTTTGAAGAAGCGGCACTACGCTTGAAAGAAACATATGCTGCAAAAATGAAGGAAGCAAGATTGAAAGCAGCACAAGAAGCAAGTGTCGTAGATGCTGCTCCTGTTGAAGATGGAGTAGAAGCTTCTCATCTGCTAGATTTTGAACATACACCCGAAGAAGAAAGTACTGTCATTGATAATTCAACCTGTGTTAATATCTCAGAGACCCTTCCATTTTCTTATGATCTGAAGGAGGATTGCTCTCAGCATGAAGATATGAATGGACAAGTAAAAATTAAATCCAGTTGTCTAACTTTAGAGCTTCCACAGGTAGTAGGAGGGCCTATTGATGCTATTGCTGATGCTCTGTCAGGCGATTCAGCTTCAAGAAATAGGCTTAATCCTAATGAGAAGGTCAAGGAAGAGATCAAGCTAGATCGCATTAGGATGTCAGTCAAGCTGGAGCCAGTTTCCGCTGCTGTGTCGGCTGATACAGTGATGATAGACTCCAGTATAGATTCCGGCTGTATGACTCAGAACAACCTATTAGGCTCTGAATGA 2076 0.4499 MNVDRYLKELSGSSQRIPTEQSFHHFYLNFDEFKRPIDEIARRSQSMLESIGVTTHAWNTGVDFPSDIDDAYEWVVDMNDELLEWFDESVSEVRKAREEDEEFEEVELENGFGLVRVKKEGGGVGKKKVEAAGTTETTKPKVSFHLATVRKPQDVYDIVVNNTNVPFEHIWLEKSEDDQRFIHPLEKHSYLEFVDKNLEGLVPMKPPAMECTPFKLVEDVKGLKELAAKLRAADEFAVDLEHNQYRSFQGLTCLMQISTRTEDFIVDTLKLRVHVGPYLREVFKDPTKKKVLHGADRDIVWLQRDFGIYVCNMFDTGQASRVLKLERFSLQYLLLHLCGVTANKEYQNADWRQRPLPDVMIRYGREDTHYLLYIYDQLRIKLFALSKESESSENPLVEVYKRSYDVCMQLYEKELLTEDSYLHIYGLLGAGFNAQQLAVVSGLNEWRDILARSEDESTGFILPNKVLLEIAKQMPVTISGLRRLTSSKLPYVDHNLDVIVNIVRHAIQNAAPFEEAALRLKETYAAKMKEARLKAAQEASVVDAAPVEDGVEASHLLDFEHTPEEESTVIDNSTCVNISETLPFSYDLKEDCSQHEDMNGQVKIKSSCLTLELPQVVGGPIDAIADALSGDSASRNRLNPNEKVKEEIKLDRIRMSVKLEPVSAAVSADTVMIDSSIDSGCMTQNNLLGSE* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1867 691 SMART hrdc7 433 513 IPR002121 GO:0003676
Ahy6g1867 691 Pfam 3'-5' exonuclease 216 381 IPR002562 GO:0003676|GO:0006139|GO:0008408
Ahy6g1867 691 Pfam HRDC domain 436 502 IPR002121 GO:0003676
Ahy6g1867 691 SUPERFAMILY HRDC-like 415 509 IPR010997 GO:0000166|GO:0044237
Ahy6g1867 691 PANTHER POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED 1 610 IPR045092 GO:0000175|GO:0000467
Ahy6g1867 691 SMART 35exoneu6 214 383 IPR002562 GO:0003676|GO:0006139|GO:0008408
Ahy6g1867 691 Gene3D - 141 421 IPR036397 GO:0003676
Ahy6g1867 691 PANTHER 3'-5' EXONUCLEASE 1 610 - -
Ahy6g1867 691 ProSiteProfiles HRDC domain profile. 433 513 IPR002121 GO:0003676
Ahy6g1867 691 SUPERFAMILY Ribonuclease H-like 149 405 IPR012337 -
Ahy6g1867 691 CDD Rrp6p_like_exo 210 402 - -
Ahy6g1867 691 Gene3D HRDC domain 422 513 IPR044876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1867 Ahy-Chr6 91493775 91502910 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1867 K12591 - gmx:100804872 743.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2176 16 121301007 121310369 Ahy6g1867 6 91493775 91502910 hybridization