Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1738 ATGAACCTGTTGTCAAGCTTCTTTAGACACCAAAACTCTCACCCTTTCACCCCTTTCGTCTTTCTCCAAAGAAGATGGAAGAAACCAACGATCTCTGCACAAACCCGTTTAGAAGACAGGGTTCGAGACACTCACCTCGATAACCTTGTATCCTGCATGTCCAAGCTCAGACTCATCCTTGGAATCCACACCTTCATGTCTTCCCGGAAGCGTGGAACCTTCGTTTCCCTGCAGCTCATGTCCCGCTGGAGGAACATCCTCGGACTCAACATCCCTATTGGCTCCTTCCTCCGCAAGTACCCACACATTTTCGAGGTGTTCCTTCACCCCGTAAGGAAGAACCCGTGTTGCAGGGTCACAAGGAAGATGAAGGAGCTGGTCCTAATGGAACGTGTTGTTGTGAGGAACAATGAGTTGGAGGTTGTGAAGAGGGTGAAGAAGCTTCTTATGATGTCAGTGAATGGCACACTTCGTGTTCATGCTTTGAGGATGATTAAAAGGGAACTTAGTTTGCCTGATGATTTCCGAGACTCAATTTTGGGAAAGCATAGTGATGACTTCAGGTTGGTTGGCTTGGAGGTTGTGGAATTGGTTTGTGAAAATGGTGAATTTGGGGTTGTTGCTGAAGTTGAGAAATGGAGGGAAAAAGAATACACTGAAAAATGGTTGAGTGAGTTTGAGACAAAGTTTGCATTCCCAATTAACCTCCCAACAGGTTTCAAGATTGAGAAAGGATTTAGAGAGAGATTGAAGAATTGGCAGAGGCTTCCTTATACTAAGCCTTATGAGAGCAAAGAGGCCATAAGGGTTAGAAACTCGGGCAGTATTGATCGGTATGAGAAGAGAGCTGTTGCTGTTCTTCACGAGCTTTTGAGCATGACTGTCGAGAAGATGGTTCATGTTGATCATTTGGTGCATTTTCGTAGGGATTTCGCAATTGAGGTTAATCTGCGCGAGTTGTTGCTGAAGCACCCTGGGATATTCTACATATCCACAAAGGGGAAAACTCAGACTGTTATTCTTAGGGAGGTATATAGGAAGGGGAGTTTGATTGAGCCTAATCCTGTTTACACTGCTCGGAGGAACATGTTGGAGCTTGTGTTGTTGCGGCATAGGAAGACAAAACAAATGGTAGATTTTGATGAATCGAGTAAAGGGGGTAACAGTGTGGTATGTAAAGCGAATGAAGGAGTTAAAAGAGAAGGAGATTGGGTGATTCCGTTCTTGGAGAGTTGTGAGGAGAAGAGGTCATTTTGA 1257 0.4471 MNLLSSFFRHQNSHPFTPFVFLQRRWKKPTISAQTRLEDRVRDTHLDNLVSCMSKLRLILGIHTFMSSRKRGTFVSLQLMSRWRNILGLNIPIGSFLRKYPHIFEVFLHPVRKNPCCRVTRKMKELVLMERVVVRNNELEVVKRVKKLLMMSVNGTLRVHALRMIKRELSLPDDFRDSILGKHSDDFRLVGLEVVELVCENGEFGVVAEVEKWREKEYTEKWLSEFETKFAFPINLPTGFKIEKGFRERLKNWQRLPYTKPYESKEAIRVRNSGSIDRYEKRAVAVLHELLSMTVEKMVHVDHLVHFRRDFAIEVNLRELLLKHPGIFYISTKGKTQTVILREVYRKGSLIEPNPVYTARRNMLELVLLRHRKTKQMVDFDESSKGGNSVVCKANEGVKREGDWVIPFLESCEEKRSF* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1738 418 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN 10 415 - -
Ahy6g1738 418 Pfam Plant organelle RNA recognition domain 41 371 IPR021099 GO:0003723
Ahy6g1738 418 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 10 415 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1738 Ahy-Chr6 84464029 84467339 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1738 - - vun:114194999 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2025 16 112307797 112310994 Ahy6g1738 6 84464029 84467339 hybridization