Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1623 ATGGCAAGAATAATGTCATCAGAGCCTTTAATTGTAGGGAGAGTGGTAGGAGATGTTCTTGATCCATTCAATGCAAGCATAAGGATGAGTGTTAGTTATGGGAACAGGCAAGTGTACAATGGCCATGAGTTCTTCCCCTCCACAGTCACCTTCAAGCCCAAGGTTGAGATTGGTGGAACTGAATTGAGGCCCTTCTTTACACTGGTCATGACTGATCCGGATGTTCCTGGCCCTAGTGATCCTTATCTCAGAGAGCACTTGCATTGGATAGTTACAGACATTCCAGGCACAACAGATGCCACATTTGGGAAAGAGTTGGTGAGCTACGAGATGCCAAAGCCTAACATTGGGATCCATAGGTATGTTTTTGTGCTCTTCAAGCAAAAACGAAGGCAGTGTGTTAGCACCATTCCTTCTTGCAGGGATCACTTCAACACCCGCACTTTCGCCGCCGATAACGACCTCGGCCTCCCCGTCGCTGCCGTCTACTTCAATGCTCAGAGGGAAACCGCTGCCAGGAGGCGTTAA 528 0.4848 MARIMSSEPLIVGRVVGDVLDPFNASIRMSVSYGNRQVYNGHEFFPSTVTFKPKVEIGGTELRPFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKELVSYEMPKPNIGIHRYVFVLFKQKRRQCVSTIPSCRDHFNTRTFAADNDLGLPVAAVYFNAQRETAARRR* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1623 175 CDD PEBP_euk 29 166 IPR035810 -
Ahy6g1623 175 Pfam Phosphatidylethanolamine-binding protein 61 163 IPR008914 -
Ahy6g1623 175 Gene3D - 2 175 IPR036610 -
Ahy6g1623 175 SUPERFAMILY PEBP-like 14 169 IPR036610 -
Ahy6g1623 175 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 4 174 IPR035810 -
Ahy6g1623 175 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 66 88 IPR001858 -
Ahy6g1623 175 PANTHER PROTEIN TERMINAL FLOWER 1 4 174 IPR031114 GO:0003712|GO:0009910
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1623 Ahy-Chr6 71914205 71915729 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1623 K06910 - qsu:112017308 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1866 16 96936619 96938369 Ahy6g1623 6 71914205 71915729 hybridization
Ahy6g1623 6 71914205 71915729 Ahy12g2949 12 119113520 119115958 PCT
Ahy6g1623 6 71914205 71915729 Ahy2g2535 2 101515595 101518033 PCT