Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1503 ATGGGAATATTACAGGACGATGTGGTGATCATAAGGCAGCCAGACAAAGAAGGTGGCCCAACCGTCATAACCGTGAATTGCCCTGACAAGACTGGTCTTGGTTGTGATCTGTGCCGCATCATTCTCTTCTTTGGTCTTAGCATTGTGCGAGGAGATGTTTCAACGGATGGGAAATGGTGCTACATAGTGTTGTGGGTGGTGGGGAGAGAGAAGACAAGGTGGAGTTTGTTGAAGAAGAGGCTAATTGGGGCATGCCCTTCTTGCTCCTCTGCCTCTGGAATCTCATATTACCGCTCTGAGTTGCAGCAACCACCGAAGCCCCCTGATGTCTTCCTCTTGAAGTTTTGTTGCCATGATCGTAGAGGCCTTTTGCATGATGTTACAGAGGTTCTTTGTGAGCTAGAGTTAACCATAAAGAAGGTGAAGGTATCTACTACACCTGACGGCAAAGTGATGGATCTGTTTTTCATCACCGACACAAGGGAACTTCTGCATACACCAAAAAGAAGGGACGACACGATTCAACAGTTGACAGATACTTTGAAGGATGCGTTAATTTCGATTGAAATTGAATTGGTTGGTCCAGAAATTGCTGCTTGCTCTCAAGCATCCTCATTTCTTCCAACTGCCATCACAGAAGATATATTCAATTTGGAATTGCCCGATCCTGGTCGAGGTGGGGTTTTCACATCAGATTCTATCTCCATTGTTATGGACAATTTGCTGAGTCCTTCCCACACACTTGTCCAAATTATGTGCCAAGATCACAAAGGTCTTCTTTATGACATCATGAGAACTCTGAAGGACTATAATATTCAGATTTCTTATGGACGCTTCATGACAAAACCTAGAGGAAAATGTGAGCTTGACTTGTTCATCATGCAAGCCGATGGCAAAAAGATAGTCGACTCGAGCAAGCAGAAGTCTTTGTCTGCTCGCCTTAGGACCGAGCTACTCCGTCCTCTCAAAGTCACTGTTGTGAGCAGGGGCCCTGATACGGAGCTACTGGTCGCAAACCCCGTGGAGTTGTCCGACAAGGGACGGCCTCTTGTGTTTCATGATATTACTCTTGCACTTAAAATGCTAGGCATATGCATCTTTTCGGCTGAAATCGGAAGACATGCAATTGGAGACCGGGAATGGGAAGTTTATAGAATCTTGCTGGATGAAGGGGAGGGATCGCCACTTCCAAGGAACAAGATTGAGAAAGGTGTATGGAATATGTTGATGGGCTGGGAGTGA 1242 0.4573 MGILQDDVVIIRQPDKEGGPTVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYIVLWVVGREKTRWSLLKKRLIGACPSCSSASGISYYRSELQQPPKPPDVFLLKFCCHDRRGLLHDVTEVLCELELTIKKVKVSTTPDGKVMDLFFITDTRELLHTPKRRDDTIQQLTDTLKDALISIEIELVGPEIAACSQASSFLPTAITEDIFNLELPDPGRGGVFTSDSISIVMDNLLSPSHTLVQIMCQDHKGLLYDIMRTLKDYNIQISYGRFMTKPRGKCELDLFIMQADGKKIVDSSKQKSLSARLRTELLRPLKVTVVSRGPDTELLVANPVELSDKGRPLVFHDITLALKMLGICIFSAEIGRHAIGDREWEVYRILLDEGEGSPLPRNKIEKGVWNMLMGWE* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1503 413 SUPERFAMILY ACT-like 108 179 IPR045865 -
Ahy6g1503 413 SUPERFAMILY ACT-like 19 81 IPR045865 -
Ahy6g1503 413 SUPERFAMILY ACT-like 244 299 IPR045865 -
Ahy6g1503 413 ProSiteProfiles ACT domain profile. 112 195 IPR002912 -
Ahy6g1503 413 Gene3D - 109 193 - -
Ahy6g1503 413 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 2 413 - -
Ahy6g1503 413 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 2 413 IPR040217 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1503 Ahy-Chr6 43982688 43985781 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1503 - - gmx:100797226 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1674 16 51865800 51868956 Ahy6g1503 6 43982688 43985781 hybridization
Ahy6g1503 6 43982688 43985781 Ahy12g3034 12 119873631 119876175 PCT
Ahy6g1503 6 43982688 43985781 Ahy2g2619 2 102275706 102278250 PCT
Ahy12g3034 12 119873631 119876175 Ahy6g1503 6 43982688 43985781 PCT
Ahy2g2619 2 102275706 102278250 Ahy6g1503 6 43982688 43985781 PCT