Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1177 ATGAACCACCTCCGCCCCCAAACCCACATCGCCCCCACCGATGGATCTGCCGCATACGACGCCTCATCCGCGGACGCAAAGCGCGGCAAGAAGCGCGGCAGTTACAACTGCGGCCGCTGCGGTCTCCCCAAGAAGGGACATAACTGCAACGTCAAAACCCCCACGTCCCCTTCTCATTCTTCTCTCTCCACCTTCTCTGCCGTTTCCGCAGCTCCTTCTTCTGCTTCCCTGGTGCGCCAGCCCCCGCCTAACCTCCGCCGTGCGCTTTCGTTTGAAGACGCCGTCGCCGGCGGTGGCTTCGATGACGACCTGATGGACCTTGCCGGAGGAGATGCTGGAGGTGCATTTCCCGAATCCGATCTCGATCTGGATCTGGATTTAGATTCTAGCGGTTTGCCGATGAGCCTTCTGTGGGAAGTGCTGAGGAGGCTGCCGCCGGCGGGGCTATTGTCTGCGGCAAGGGTGAGTAGAGTTTGGAGGGAGACGACGAAGAGGTTGTGGAGGGCAGCAGAGGAGTTGAATGTTAGGGTTCCGGCGAGAGTTCAGGTGGGTTCTGTTGCGTCGATGTTGCAGAAGTGCCCGGGAATTGTGAAGCTCTCTATTAAAATGGAGAGTGATGTGGATTCAACCATGTTGGCTTGCATTGCCTTCTCATGCCCCAATCTGGAGTACATGGAGATCTCGACCACTGACACTGCTATCAATCGGATCAATGGGGATGAATTAAGTCGATTTGTTTCGGAAAAGAAAAGTCTAAAGAGCCTCAAGATGGAAGGTTGCTGTAATCTAGGCCGTCTTGTTCTTTGTTCATCTAGTCTTTCCACGCTTTGGCTGTCAGATTTGTTCTCTCTTTCAAAGATGGTCTTTAACTGTCCCCAGTTAAGAGAGATTTCCTTGGAGTTCTCTCGTCAAGAAAATGATGGTACTGATCTCAAAACTTTGATGGAAGGTTTGGGAAGAAGTTGCCCCAGTTTGCAGAACATACATATATCTTCAATGCACCTTTCTCATGCTGTTGTGCTTGCTATTACGGCTGCGCATTTAAGGGAGTTGCGAATGCTTTCACTTGTTCTTGGATCTGAAATAACTGATGCATCTGTTGCTGCAATTGCTTCAAGCTACCCAAATTTGGAATTACTTGATCTCAGTGGATCTGGCATAAGTGACAGTGGCATTGGAATGATTTGCAATGTATTCAGTGAAACATTGACAAGACTACTTCTTGCTCTTTGCCCCTGTGTGTCTTCAAGTGGTATTCAATTCGCTATGGCTCAGTTACCAAACCTTGAACTTATGGACTGTGGTATGACCATATGTGATCCTAATTCCGACAATCCGACTGGAGACGACAATAGTTGTGAATCACAACACAGATCTATTGCTAATGGTCACCTAACAAACCAGAAGCTAATCATCAAACATAGCCGTTTAAAGAAACTTAGTTTATGGGGTTGTTCTGGCTTGGATGCTTTATATTTAAACTGCCCACAACTTACTGATCTCAACCTAAATTCTTGTAGAAATTTGCATCCAGAGAGGCTGTTACTTCAGTGCCCTGGTTTGGAAAATGTGCATGCATCTTGCTGTCAGGATCTTCTAATTATGGCCATCCAAAATCAGGTCCGCAATGCTTATACAGCCATGGAAAATCTTTTGCTTTGTAAGCGTTTACCTGACGGGTCCAAAAGGGTCCGGGTTCCTCATCATTTACTCAGTAACGAGTCACTTGAAGATGATAATAAACGGAGAAAAATTGAGAGACGGCTTTGTAATGTGGTTGTGGACTGA 1788 0.4754 MNHLRPQTHIAPTDGSAAYDASSADAKRGKKRGSYNCGRCGLPKKGHNCNVKTPTSPSHSSLSTFSAVSAAPSSASLVRQPPPNLRRALSFEDAVAGGGFDDDLMDLAGGDAGGAFPESDLDLDLDLDSSGLPMSLLWEVLRRLPPAGLLSAARVSRVWRETTKRLWRAAEELNVRVPARVQVGSVASMLQKCPGIVKLSIKMESDVDSTMLACIAFSCPNLEYMEISTTDTAINRINGDELSRFVSEKKSLKSLKMEGCCNLGRLVLCSSSLSTLWLSDLFSLSKMVFNCPQLREISLEFSRQENDGTDLKTLMEGLGRSCPSLQNIHISSMHLSHAVVLAITAAHLRELRMLSLVLGSEITDASVAAIASSYPNLELLDLSGSGISDSGIGMICNVFSETLTRLLLALCPCVSSSGIQFAMAQLPNLELMDCGMTICDPNSDNPTGDDNSCESQHRSIANGHLTNQKLIIKHSRLKKLSLWGCSGLDALYLNCPQLTDLNLNSCRNLHPERLLLQCPGLENVHASCCQDLLIMAIQNQVRNAYTAMENLLLCKRLPDGSKRVRVPHHLLSNESLEDDNKRRKIERRLCNVVVD* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1177 595 MobiDBLite consensus disorder prediction 1 35 - -
Ahy6g1177 595 Gene3D Ribonuclease Inhibitor 313 439 IPR032675 -
Ahy6g1177 595 Gene3D Ribonuclease Inhibitor 125 312 IPR032675 -
Ahy6g1177 595 SUPERFAMILY RNI-like 186 437 - -
Ahy6g1177 595 SUPERFAMILY F-box domain 130 170 IPR036047 GO:0005515
Ahy6g1177 595 Pfam F-box domain 130 165 IPR001810 GO:0005515
Ahy6g1177 595 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 27 594 - -
Ahy6g1177 595 Gene3D Ribonuclease Inhibitor 451 577 IPR032675 -
Ahy6g1177 595 ProSiteProfiles F-box domain profile. 126 170 IPR001810 GO:0005515
Ahy6g1177 595 PANTHER F-BOX/LRR-REPEAT PROTEIN 17-LIKE ISOFORM X1 27 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1177 Ahy-Chr6 17301931 17306523 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1177 - - gmx:100792669 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0153 16 1585101 1589735 Ahy6g1177 6 17301931 17306523 hybridization