Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1127 ATGAGAGATGAGAACTCCAAGAAAAGCAAGCTTTCATGGCCCAAGACATTGGTCAAGAAGTGGTTCAATATCAAGTGCAAAACTGATAACTTTCAAGCAGATGATGACGTTGATGATGATGTCCTTTATCAAGGTATTGATGAAGAGAGGAAGAGCAACTATTCAGAGAAGGAGGCATGCACCATCAAAAAAAGCAAAACAGATAAACCAAGCAGAAGATTCTCAGACAGAATTCATAGAGGTAAGAATGACCTTGATGAAGCTCAGATTACAGAAGTGTATAATTATAGAATCTTTGTTGCCACTTGGAATGTAGCAGGGAAGTCACCTCCAAGTTATTTGAACCTTGAAGATTGGCTTCACACCTCTCCACCCGCTGATATCTATGTTCTTGGGTTTCAAGAAATTGTACCTCTTAATGCTGGTAACATTTTGGGAACAGAAGACAATGGCCCTGCAAGGAAATGGCTTACACTTATTAGGAAGACCCTTAACAGTCTTCCAGGAACAAGTGGTGGATGCCACACTCCATCACCACTCTCTGATCCTATTATAGAGATTGAAGCTGATTTTGAGGGATCAATGAGGCAGAAGACAACCTCTTTCCTCCATAGAAGGTCTTTCCAATCCTTGAGTCATAGTATGAAAATGGATAGTGACATCTCACTGCCACAACCGAGCTTTGATCGGCGTCTCAGCGTCTGTGATAGAATGATATATGCTCACAGGCCTAGTGACTACCGATGGGGTTCTTCAGATGATGAAAATGGAGCTGGGGACTCCCCAGTTACGGCATCATATTCGCCAGTGCAATATAGCGGTTGTTTCCCTATGGAGGATGTTGAGAAACAGACAGGGCAACCGAGATATTGTTTGGTTGCTAGTAAGCAAATGGTGGGGATATTTCTAACAGTTTGGGTGAAAAGTGATATCAGAGATTATATTCACAGCTTGAAGGTGTCTTCTGTTGGCAGAGGTTTGATGGGATATCTTGGAAACAAGGGTTCAATATCAATTAGCATGTCTTTGCACCAAACAAGCTTTTGTTTCATCTGTAGTCATTTGACTTCAGGGCAAAAGGATGGTGATGAGCTAAGGAGAAACTTAGATGTAATGGAAATTCTGAGAAAGACAAGGTTTCCCCTTGTCCAAGGCACCAGTGACCATTATTCACCTCAGACAATTCTGGAACATGACCGAATAATTTGGCTGGGGGATTTAAATTATCGGGTAGCCCTTTCTTATCGTGCGGCGAAAGCTCTTGTTGAGATGCATAATTGGAAGGACTTGTTAGAGAATGACCAACTGCGAATAGAGCAGAGGCAAGGTCGAGTATTCGAAGGATGGAACGAAGGGAAAATATATTTCCCTCCCACATACAAGTATTCAAACAACTCAGACAGGTGTGATAGAATCTTATGGCATGGGAGAGGCCTTCACCAATTATCTTATGTTCGTGGGGAGTCAAGATTCTCTGATCATAGACCTGTGTATAGCATATTCTCAGCAGAAGTTGATCAAAGAAGCTCTAGTTACTCCAATTAA 1545 0.4194 MRDENSKKSKLSWPKTLVKKWFNIKCKTDNFQADDDVDDDVLYQGIDEERKSNYSEKEACTIKKSKTDKPSRRFSDRIHRGKNDLDEAQITEVYNYRIFVATWNVAGKSPPSYLNLEDWLHTSPPADIYVLGFQEIVPLNAGNILGTEDNGPARKWLTLIRKTLNSLPGTSGGCHTPSPLSDPIIEIEADFEGSMRQKTTSFLHRRSFQSLSHSMKMDSDISLPQPSFDRRLSVCDRMIYAHRPSDYRWGSSDDENGAGDSPVTASYSPVQYSGCFPMEDVEKQTGQPRYCLVASKQMVGIFLTVWVKSDIRDYIHSLKVSSVGRGLMGYLGNKGSISISMSLHQTSFCFICSHLTSGQKDGDELRRNLDVMEILRKTRFPLVQGTSDHYSPQTILEHDRIIWLGDLNYRVALSYRAAKALVEMHNWKDLLENDQLRIEQRQGRVFEGWNEGKIYFPPTYKYSNNSDRCDRILWHGRGLHQLSYVRGESRFSDHRPVYSIFSAEVDQRSSSYSN* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1127 514 Pfam Endonuclease/Exonuclease/phosphatase family 101 494 IPR005135 GO:0003824
Ahy6g1127 514 MobiDBLite consensus disorder prediction 57 76 - -
Ahy6g1127 514 Gene3D Endonuclease/exonuclease/phosphatase 275 514 IPR036691 -
Ahy6g1127 514 Gene3D Endonuclease/exonuclease/phosphatase 76 201 IPR036691 -
Ahy6g1127 514 PANTHER PHOSPHORIC MONOESTER HYDROLASE-RELATED 3 510 - -
Ahy6g1127 514 SUPERFAMILY DNase I-like 83 505 IPR036691 -
Ahy6g1127 514 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 3 510 IPR045849 GO:0004445|GO:0046855
Ahy6g1127 514 SMART i5p_5 230 509 IPR000300 GO:0016791|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1127 Ahy-Chr6 16508267 16512299 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1127 293 462 Acyl Lipid Metabolism Gene Families AT2G43900 29.592 2.94e-23 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1127 - - adu:107493007 1037.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0194 16 2056113 2060145 Ahy6g1127 6 16508267 16512299 hybridization
Ahy6g1127 6 16508267 16512299 Ahy12g0764 12 13277643 13283550 PCT
Ahy6g1127 6 16508267 16512299 Ahy2g0632 2 9800160 9805027 PCT
Ahy12g0764 12 13277643 13283550 Ahy6g1127 6 16508267 16512299 PCT
Ahy2g0632 2 9800160 9805027 Ahy6g1127 6 16508267 16512299 PCT