Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1123 ATGGCTGGACTTATTGAAGGACTCCCTGATGCTGTTGCAATAAGGTGCCTTGCTCGGGTTCCCTTCTACCTCCATCCGAAGTTAGAGGTTGTTTGCCGTTCTTGGCAAGCAGCCGTTCGTAGCCCTGAACTATTTAAAGCCCGGCAGGAGGTTGGTTCATCAGAGGAGCTGTTATGTGTCTGTGCTTTTGACCCAGAGAACGTGTGGCAGCTGTATGACCCTCAACGAGATCTGTGGATTACACTTCCGGTTCTTCCCTCAAAAATCAGGCATCTTTCGCACTTTGGTGCTGTTTCCACTGCTGGAAAGTTGTTCGTGATTGGCGGTGGCAGTGATGCAGTTGACCCCTTGACTGGTGACCAAGATGGCTGTTTTGCAACAGATGAAGTCTGGTCATATGATCCCGTAGTCCGGCAGTGGGCCCCTCGAGCATCAATGCTGGTTCCGCGCTCTATGTTTGCATGCTGTGTTTTGAATGGGAAAATTGTTGTGGCTGGGGGCTTCACCAGCTGCCGAAAATCAATATCTCAAGCAGAAATGTATGACCCTGAGAAGGATGTATGGATTCCAATGGCTGATCTTCATCGCACCCACAATTCAGCCTGTTCAGGAGTAGTGATAGGTGGAAAGGTGCATGTGCTGCACAAGGACATGTCAACAGTTCAAGTTTTAGACAATGCGGGGCCTGGATGGATTGTTGAGGAATGTGGGTGGCTCCAAGGTCCTATGGCGGTTGTTCAGGATGCACTTTATGTGATTAGCCATGGATTCATCTTCAAGCAGGACAAAGAAGGGAGAAAGGTGGTAGGTTCAGCTTCCGAGTTCCGAAGGAGAATTGGGTTTGCAATGATAGGGGTGGTTGATGATCTATACGTGATTGGAGGCTTCATTGGCCCTGACAGATGGGACTGGGACATTAAGCCATTATCAGATGTCGATATTCTCACACTTGGGAGTGAGAGACCAAATTGGCGCCAGGCAGCTCCAATGACAAGATGTCGTGGTACTATTCTTGGTTGTACACTGCTGAGAATTTAG 1038 0.4894 MAGLIEGLPDAVAIRCLARVPFYLHPKLEVVCRSWQAAVRSPELFKARQEVGSSEELLCVCAFDPENVWQLYDPQRDLWITLPVLPSKIRHLSHFGAVSTAGKLFVIGGGSDAVDPLTGDQDGCFATDEVWSYDPVVRQWAPRASMLVPRSMFACCVLNGKIVVAGGFTSCRKSISQAEMYDPEKDVWIPMADLHRTHNSACSGVVIGGKVHVLHKDMSTVQVLDNAGPGWIVEECGWLQGPMAVVQDALYVISHGFIFKQDKEGRKVVGSASEFRRRIGFAMIGVVDDLYVIGGFIGPDRWDWDIKPLSDVDILTLGSERPNWRQAAPMTRCRGTILGCTLLRI* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1123 345 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP30 2 345 - -
Ahy6g1123 345 Gene3D - 62 343 IPR015915 GO:0005515
Ahy6g1123 345 SUPERFAMILY Kelch motif 61 334 IPR015915 GO:0005515
Ahy6g1123 345 Pfam Kelch motif 149 194 IPR006652 GO:0005515
Ahy6g1123 345 Pfam Kelch motif 92 146 IPR006652 GO:0005515
Ahy6g1123 345 SMART kelc_smart 161 208 IPR006652 GO:0005515
Ahy6g1123 345 SMART kelc_smart 289 344 IPR006652 GO:0005515
Ahy6g1123 345 SMART kelc_smart 103 160 IPR006652 GO:0005515
Ahy6g1123 345 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 2 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1123 Ahy-Chr6 16481818 16485822 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1123 8 188 Miscellaneous Gene Families AT4G33900 27.368 3.55e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1123 - - gmx:100800954 657.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0198 16 2083885 2087920 Ahy6g1123 6 16481818 16485822 hybridization