Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1108 ATGTCTTCTCATCACTACTTCTTTTCCACCTACTTTCACCCTTCTTCTCTCTTTTCTTCTTCTTATCGTACTCTTCTCCCTTTTTCTCATCTAATATTCTCCAAAACCTCTGCGTGTGTTGCGTTTTCGGAGGCTAATAATAAAGGCAAAAAACAAGAGGCATTAAGATACAGAGCTGTCTCGAAACCACGAGAAACATTGGAGGGTGGCATAACAACCTTAAAGGTGAATGAGATTAATGTAGACGAAACAATACAAGAGGAGCAAAATACTGAGGTTGAAGTGAAGGATGAGATCAAAAAACGGGTGAAAGCTATAAAATCATTGTTGGATTCGATGGAAGATGGAGAGATATCAGTGTCTGCCTATGACACAGCATGGGTTGCTCTTGTTGAAGATGTTAAAGGAAGTGGTTCTCCTCAATTTCCAAAAAGCCTTGAATGGATTTCAAACAACCAACTCCTTGATGGTTCTTGGGGTGACAGTCAAGTATTCTCAGCCCATGATCGAATCCTCAACACCTTGGCTTGTGTCGTTGCATTAAAAACATGGAATATGCATCCTGAACAATGTGACAAAGGAATGAAATTCTTCAAAGAGAACCTTGAGAAGCTTCAGAATGAGAATGATGAACACATGCCAATTGGTTTCGAAGTAGCTTTCCCTTCACTTATGGACATAGCGCGTAAGCTGAACATTGAAGTGCCCGAGGATTCACCTATATTAAAAGAAATTTATGCCAAGAGAAACTTAAAACTAACCAGAATACCAAGAGAAGTGATGCATAAAGTGCCCACAACTCTTTTACATAGCTTGGAAGGGATGTCAGGCTTGAATTGGAAACAGCTTCTAAAACTTCAATCTCAAGATGGCTCATTCTTGTTCTCTCCATCTTCCACTGCGTTTGCTCTCATGCAAACCAAAGATCACAATTGCTTCTCTTACTTGAATAAAGCTATTAATAAGTTCAACGGTGGAGTTCCAAATGTGTATCCAGTGGATTTGTTTGAACATCTTTGGACGGTAGATCGATTACAGCGTCTTGGGATATCGCGATATTTTGGCCAACATATCAAAAACTGTTTGAGCTATGTTTTCAATTACTGGACTGAAAAGGGTATTTGTTGGGCAAAAAATTCGAGTGTTCAAGATATTGATGACACAGCAATGGGTTTCAGATTACTAAGACTACACGGGTATAAAATGCCAGCCAATGTGTTTGAAAACTTCCAAAGAAACGGTGAATTTTTTTGCTTTGCTGGGCAATCAACACAAGGGTTGACCGGAATGTTCAATCTATATAGAGCAACACAATTGATGTTCCCTGGAGAAGAGATTCTTGAGAGTGCAAAGAGTTTTTCTAAAAAGTTTTTGAGGGAAAAACGAGAGTCAAATCAGCTAGTTGATAAATGGATCATAATGAAGAATTTGCCAGAAGAGGTGGCATATGCTTTGGACATCCCATGGTATGCAAGCTTAAATAGAGTGGAGACAAGATTCTACATTGATCAATATGGTGGTGAGAATGACATTTGGATTGGCAAAACTCTTTACAGGATGCCAATTGTAAACAACAACCACTACTTGGACCTAGCTAAATTAGATTACAACAACTGCCAAGCTGTCCATCTAACAGAATGGAAAAAGATTCAAGAGTGGTACTCAAATTTGAAATTAGCAGAATTTGGACTGAGCAAAAACTCTCTGCTATTGGCATACTTTTTGGCGGCAGCCAGCATCTATGAACCTGAAAGGTCTCAGGAGAGGCTTGCATGGGCCAAGACCACTGCATTGCTTGAAACAATAGCATCCTATGTTACCGATGACGATGCTGATTCAAGAAAAGATTTCGTTACAAAATTCACTCAATGCTTTGACAAATGTGACAATTCTGTTGGATGGAGGTTGAAGAAGAATAAAACAGGACAGGAACTTGCTCAGACTTTGGTTGCAGATATAGATCAAATTTCTTGGGATATACTCGTATCTCATGGTCATGAAATTGGATATGACATGCATCATGCATGGAAAAAATGGCTTTCAAGTTGGCAATTAGAAGGGAACAATTGCGAAGGAAAAGCAGGGCTATTGGTGCATATAATAAACCTAAGCGGTGGACATTGGAATTCAGAGGAAGAGCTGAGCTTCAATCCACAATATCAGCATTTGCTCCAATTAACCAACTCAGTGTGTCACAAGCTCTATTCTTTCCAAAAGGACAAGGAAAATGAGCCTGGAAGGTACAATGGGAAGCACAAGATTACAACTTCAGAAGTAGAGTCTGAGATGAGAGAACTTGTGCAGTTGGTGTTACAAAAATCTTCAACTAATGACCTTGGTTTCAACATAAAGAACACTTTCCTGATGGTGGCAAAGAGTTTTTACTATGCAGCCTTTTGTGATTCAAGGACCATCAACTTCCATGTTGCTAAAGTTCTCTTTGAGAAAGTTGTTTGA 2457 0.3923 MSSHHYFFSTYFHPSSLFSSSYRTLLPFSHLIFSKTSACVAFSEANNKGKKQEALRYRAVSKPRETLEGGITTLKVNEINVDETIQEEQNTEVEVKDEIKKRVKAIKSLLDSMEDGEISVSAYDTAWVALVEDVKGSGSPQFPKSLEWISNNQLLDGSWGDSQVFSAHDRILNTLACVVALKTWNMHPEQCDKGMKFFKENLEKLQNENDEHMPIGFEVAFPSLMDIARKLNIEVPEDSPILKEIYAKRNLKLTRIPREVMHKVPTTLLHSLEGMSGLNWKQLLKLQSQDGSFLFSPSSTAFALMQTKDHNCFSYLNKAINKFNGGVPNVYPVDLFEHLWTVDRLQRLGISRYFGQHIKNCLSYVFNYWTEKGICWAKNSSVQDIDDTAMGFRLLRLHGYKMPANVFENFQRNGEFFCFAGQSTQGLTGMFNLYRATQLMFPGEEILESAKSFSKKFLREKRESNQLVDKWIIMKNLPEEVAYALDIPWYASLNRVETRFYIDQYGGENDIWIGKTLYRMPIVNNNHYLDLAKLDYNNCQAVHLTEWKKIQEWYSNLKLAEFGLSKNSLLLAYFLAAASIYEPERSQERLAWAKTTALLETIASYVTDDDADSRKDFVTKFTQCFDKCDNSVGWRLKKNKTGQELAQTLVADIDQISWDILVSHGHEIGYDMHHAWKKWLSSWQLEGNNCEGKAGLLVHIINLSGGHWNSEEELSFNPQYQHLLQLTNSVCHKLYSFQKDKENEPGRYNGKHKITTSEVESEMRELVQLVLQKSSTNDLGFNIKNTFLMVAKSFYYAAFCDSRTINFHVAKVLFEKVV* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1108 818 Gene3D Farnesyl Diphosphate Synthase 539 818 IPR008949 -
Ahy6g1108 818 Gene3D - 122 334 - -
Ahy6g1108 818 SUPERFAMILY Terpenoid synthases 524 799 IPR008949 -
Ahy6g1108 818 Gene3D - 105 537 IPR036965 GO:0010333|GO:0016829
Ahy6g1108 818 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 85 815 - -
Ahy6g1108 818 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 290 510 IPR008930 -
Ahy6g1108 818 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 85 815 - -
Ahy6g1108 818 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 94 403 IPR008930 -
Ahy6g1108 818 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 92 519 - -
Ahy6g1108 818 SFLD Terpene Cyclase Like 1 N-term 92 519 - -
Ahy6g1108 818 Pfam Terpene synthase family, metal binding domain 529 690 IPR005630 GO:0000287|GO:0010333|GO:0016829
Ahy6g1108 818 Pfam Terpene synthase, N-terminal domain 279 485 IPR001906 GO:0010333|GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1108 Ahy-Chr6 16206684 16214038 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1108 K04120 - gmx:100784193 1159.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0214 16 2275345 2282693 Ahy6g1108 6 16206684 16214038 hybridization