Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1044 ATGGCAGAGGAGGAATCCATCATAGAGAAGGTGGAAGAGTACACCAAGAACGCAGGGTTTCACCAGTTGGAAACTCTACGCTCAATCCTTCAACACAATTCAAAAGTGCAATATCTCCAACCATTTATCTCTCATCTTGATGTGAATACTTTCAGGACTATGGTGCCTCTGTCTTCCTATGATGACTATGTTGACTACATCAATCAAATGGCAGAACATGGAAAACAACATCATGATCCTCCTCTTCTCTCTGTTGATCCCCTCCTCTGCTTCTTCTACAGCTCAGGAACAAGCTCCATGAAGCCTAAATTGATCCCTTATTTTGATTCAACCCTTTCCCAAGCTGCATCCTTTATTGCTCACAGAGGCAGCACTGCAGTTCTTCACAGGTTCTTTCCTCCAAGGCCAGGGATTAACAAGATCCTTTGGTTTCTCTATGCTGACAATATCACAACTACTAAATGCGGCTTCAAGGTTATGGCTGCATCTTCTTACTCTTTGCAGAGTGGTAAGGCCGAACCTCAACAACTTGCTGTCTATTCAAGCCCTCCACAAGTGTTTCTTGGATCTATTGTTGAGCATCAAATGTATTGCCACCTTCTCTGCGGCCTAAGGAATCTCGAAGCAATCGATGCTATTCGAACCCCTTATGCTGTAGGATTGGTTAAGGCTTTTGGCCTTCTAGAGTCCAAATGGGAGCAGCTTTGTGATGATCTTGAATGTGGCTTCCCAAGTATTGAAGTTTCAGATGTGGCAATGAGGGAAGATGTGATTAAAGCACTTGGAGGGCCTCAACTGGAATTGTCAAACAGAATAAGGTTAATTTGTAGAGGTAATAATGATAATTGGGGTGGTATTGCTCATAGATTGTGGCGAAATATTCGTTATATAAGGTGTGTTTGCACTGGAAGCATGATGCAGTATTATCCAAAGCTGAAGTATTATGCAGGAGAGGTACCTATTGTTGGAGGAGATTACTTTGCTTCTGAGTGCTGTGTTGGCATAAATTTAGACATAATGCAACCTCCTGAGACGACACGATTCGTGATACTTCCAACGGCTGCATACTTTGAGTTTCTTCCATTTAACATGAACGAGGAGAGCAATGATGCTGCTGATGAAACAGTGGATCTTAGCAGTGTAGAGGTTGGGAAGATGTATGAAGTGGTTGTTACTACTTATAGAGGATTCTATCGCTATCAGTTAGGCGATGTAGTGAAAGTTGTTGGATTCTATAACAAATCTCCAGAAGTAGAATTTGTGATGAGAGCACCTAAAACTCATGCTGAGATTCTAACAGAGAAGGACTTGGTTTCAGCAATTGAAAACTTTCAACTTGCAGTAAGGGGTGCCATGATGAAAATAGAGATAGTTGAGTTTGCAAGTTTCTTGGACCAGGAATCACAGCCAAAGCAGTTGAAGGTGTTTGCAGAAGTTCAAGAGGAATCTGATTTCATGGAGGACAAACTAGAAGAGTCAACAATGATATTGAAAAGGTGTATTTCCTCACTTGAAAGTGGCTTTGGAGCTTTGTACAAGGTGGAGAAGGATAAGGGTCAAGTAGGGAACTTAGTGTTATTCATTCTAAGGCCTGGAGCATTTGATAAGTTATATGAAGTAGCCATTAGAAATGGAACACCAGCTAGTCAATATAAACCACCCAAGATTATAAGAAATCATGAAATTGTCACACTCTTGCAAAAATATAGTTTTGTGACATTGAATGATATTTAG 1734 0.4095 MAEEESIIEKVEEYTKNAGFHQLETLRSILQHNSKVQYLQPFISHLDVNTFRTMVPLSSYDDYVDYINQMAEHGKQHHDPPLLSVDPLLCFFYSSGTSSMKPKLIPYFDSTLSQAASFIAHRGSTAVLHRFFPPRPGINKILWFLYADNITTTKCGFKVMAASSYSLQSGKAEPQQLAVYSSPPQVFLGSIVEHQMYCHLLCGLRNLEAIDAIRTPYAVGLVKAFGLLESKWEQLCDDLECGFPSIEVSDVAMREDVIKALGGPQLELSNRIRLICRGNNDNWGGIAHRLWRNIRYIRCVCTGSMMQYYPKLKYYAGEVPIVGGDYFASECCVGINLDIMQPPETTRFVILPTAAYFEFLPFNMNEESNDAADETVDLSSVEVGKMYEVVVTTYRGFYRYQLGDVVKVVGFYNKSPEVEFVMRAPKTHAEILTEKDLVSAIENFQLAVRGAMMKIEIVEFASFLDQESQPKQLKVFAEVQEESDFMEDKLEESTMILKRCISSLESGFGALYKVEKDKGQVGNLVLFILRPGAFDKLYEVAIRNGTPASQYKPPKIIRNHEIVTLLQKYSFVTLNDI* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1044 577 Pfam GH3 auxin-responsive promoter 11 560 IPR004993 -
Ahy6g1044 577 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 4 570 IPR004993 -
Ahy6g1044 577 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.6-RELATED 4 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1044 Ahy-Chr6 13887857 13890314 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1044 1 568 EF-hand Containing Proteins AT1G23160 30.875 8.18e-84 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1044 K14487 - gmx:100786829 861.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0281 16 6166644 6168968 Ahy6g1044 6 13887857 13890314 hybridization