Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1002 ATGGACCAAAAGATTGAGCATTTCAGCCATGTGCACCCATTGCTATTGAAAGAGGATCACAAGAATGAAGATGATGGGGTGAAACTAGTTTCTTGCTCAGCCTGTGAGGAACAGATTTCAGGTCCTTCCTATTCTTGTAAAGAATGCAACTACATTCTTCACAAATCATGCATAGAACTTCCACTCAAATTGAAGCATCCCTTGCACCCTCAACACCCTCTCACACTCCTTTCAACTCCACCTTATGATGCAGGGTACTTTTGTGATGCATGCAGAGGAACCTTCAACAATGGATTTGTCTACCATTGCTCTCTTTGCACCTATGATCTTGACATATCATGTGCTTCTACATGGCACCCTGATGATGGCCATGTTCATGCCTTCATTTCCTTGAATAGTTTGCAGCCATTTGTTTGTTATGCTTGTGGAGGCGAAGCTGGCGAGGGCTCGGCCTCCTTTTGCACTGCTTGCCAGATTTGGGTTCATTGCAGCTGTGCTGAATTGCCTCATACCATCATAAAACACTTCCATCATCATCCTTTGCAGCTCACCTATTCGCTTAATCGTGTTTACGGATTCAGGGATGACATAACTTGTGGTGTATGTCATGGAACAATGAGTTCAGGATTTGCAGGTTATTATTGTTCAGATTGCAGATTTCCAATGCATTTGAAGTGTCCAGCAAAACAAGAAGAGGATTTTGAGTCTGATACTGAAGAAGAAAAGGATCATGAAGATGAAACGCTTGCTCTTGATAAGGACAAAGAATCCAATGTTGATTTCGGACATAACCATTTGTTAACATTGATAGAGGAGGTGAGTTTGGAATTTGCTGATAAACTCTGTGATGGGTGTGTACAAGCCATCACTGCACCACCATTGTATTCTTGTTCAGAGAATTGTGGTTTCCTTCTTCATAAGAGCTGTGCTGATTTGCCTAAAACGAAGCAGCACCGGTTTCATCCTCATCCTTTGACTCTTCATTCTAAGGCAACTTCTTATGATGGCATTTATAGGTGTGATAGCTGCAAATCATTGAGCAATGGCTTTGTGTATCGCTGCGACGAATGTCAGTTCGACCTTGATGTTCGTTGTGGCACCCTTGAGGACAAAGTTAAGCATGAAAGCCACAAGCATCCTCTCTCCGTAGAGAAGATAAACATTGCAAGGGAATGCAAATGTTGTCACTCTCCATCAAAATATGTGCTTGTATGTGATGTTTGTGATGATTTTGCCATTGATTGTGGGTGTGCTAATCTACCCTCTAAGATTTGGAACAAGTGTGACAAACATGTTCTGAGTCTAATCTACAATGGTCAAGGTAAATTGATGGAATGCAATAACTGTGGCATTTGCAGAGAGGAAATATCTGCAAAGAAATGGTTGTACTATTGTGAAGAATGTGATTTTGGTGCTCATCCTTCTTGTGTAGTTGACAAGTCTTGTAGTAGTGTCAAATTTGGAGGCACTTTCCAATATGATGCACACACTCACCCTCTTGCATTGGTTGAAGAAACTGGGAAGCACCCTCCTCCTCCATGTGAAGCTTGCGGTGAAGGCTGCAAAGGTTGGACACTTGAATGTGAGCAATGCAAATGCTACTTCCACAGAGAGGGGCAATGTTTCTGGGAGCAGCTTAAGAAGAGTTCACAGTACTTGACACTGTCTAGAACGATGAGGCATAAATTTGCAGCAAATGTGTTGGCTGCCACTCCCAATGTAACTGATAAATGA 1734 0.4227 MDQKIEHFSHVHPLLLKEDHKNEDDGVKLVSCSACEEQISGPSYSCKECNYILHKSCIELPLKLKHPLHPQHPLTLLSTPPYDAGYFCDACRGTFNNGFVYHCSLCTYDLDISCASTWHPDDGHVHAFISLNSLQPFVCYACGGEAGEGSASFCTACQIWVHCSCAELPHTIIKHFHHHPLQLTYSLNRVYGFRDDITCGVCHGTMSSGFAGYYCSDCRFPMHLKCPAKQEEDFESDTEEEKDHEDETLALDKDKESNVDFGHNHLLTLIEEVSLEFADKLCDGCVQAITAPPLYSCSENCGFLLHKSCADLPKTKQHRFHPHPLTLHSKATSYDGIYRCDSCKSLSNGFVYRCDECQFDLDVRCGTLEDKVKHESHKHPLSVEKINIARECKCCHSPSKYVLVCDVCDDFAIDCGCANLPSKIWNKCDKHVLSLIYNGQGKLMECNNCGICREEISAKKWLYYCEECDFGAHPSCVVDKSCSSVKFGGTFQYDAHTHPLALVEETGKHPPPPCEACGEGCKGWTLECEQCKCYFHREGQCFWEQLKKSSQYLTLSRTMRHKFAANVLAATPNVTDK* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1002 577 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 9 541 - -
Ahy6g1002 577 SUPERFAMILY Cysteine-rich domain 150 226 IPR046349 -
Ahy6g1002 577 SMART PHD_3 31 92 IPR001965 -
Ahy6g1002 577 SMART PHD_3 138 219 IPR001965 -
Ahy6g1002 577 SMART PHD_3 448 497 IPR001965 -
Ahy6g1002 577 SMART PHD_3 281 344 IPR001965 -
Ahy6g1002 577 SUPERFAMILY Cysteine-rich domain 396 478 IPR046349 -
Ahy6g1002 577 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 9 541 - -
Ahy6g1002 577 SMART c1_12 177 232 IPR002219 -
Ahy6g1002 577 SMART c1_12 10 63 IPR002219 -
Ahy6g1002 577 SMART c1_12 429 482 IPR002219 -
Ahy6g1002 577 SMART c1_12 124 171 IPR002219 -
Ahy6g1002 577 SUPERFAMILY Cysteine-rich domain 35 119 IPR046349 -
Ahy6g1002 577 SUPERFAMILY Cysteine-rich domain 293 379 IPR046349 -
Ahy6g1002 577 MobiDBLite consensus disorder prediction 231 250 - -
Ahy6g1002 577 Pfam C1 domain 8 58 IPR004146 -
Ahy6g1002 577 Pfam C1 domain 262 310 IPR004146 -
Ahy6g1002 577 Pfam C1 domain 176 226 IPR004146 -
Ahy6g1002 577 Pfam C1 domain 320 365 IPR004146 -
Ahy6g1002 577 Pfam C1 domain 67 115 IPR004146 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1002 Ahy-Chr6 13161552 13164059 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1002 - - vun:114181199 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0330 16 6832136 6834525 Ahy6g1002 6 13161552 13164059 hybridization