Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0977 ATGACGGAACCGATCGAGCCAAGCACATCGTCGTCAATGAGCACGGTGTTTCTTCACCCTCGGCGCGAGCCCTTCGAGCACGGCCTCTTACCGATCCCGAAGCTCATCTTCTCCGACCCCGCGCAAACCCTAATTTCGCTGAAGCAGAAGCTTCTTGAGCTCTCCTCCGGCGGCAAAGTCGATCCGGCGGCGATCTCCGAGTCTCTTCAGATCTCGCTGGACCACGCCAGGCTCGTCCTTGACACGCTTTCCTCCGTCCTCCCATCTTCGGAGACCGAGCCACCCACCGCCGAAGTCTCCGCCGTCGACTTGCATGATCTGTTGCTGTTCCTGTACATTCAATCCTACAAGAGGCTCCTGCCGCGCACGCACAAGGACTCCGTCGCCGTTGCTGACGTCTGGCCTTCCACCTCCGCCTTCGATGGCTACTTGTCCGCTCTCTCGCCGCTTCAGCTTGTCCGGAGCAACAGCCGGCGGTTTATGCCGTCACAGGCTGACGAGGAGGCGCATCAATTGTCATACCTGCAGAAGCACTTGGCTAACATTCTGTCTCTCCTAGCTGAGCCCGTGGAGGGGGAAGGGGAAGAATCTCTGGTTTTATCCATGGATAGATTTGAACACCTTGGGTTTCTAGTTCAGTTTGGTGATAAGGGATCTGAAGGAAATTCTTTGAGTCAACATTCTCCTTTCTTTGCAAACTCAGATCCTGACATGCCAGCTGTTCCTGCTCCTGCTGCACAAGTTCATGATTGGCTTCTGCAGAATATAACATCTGCATTGGAACACATTTCTGAACGGACTTCTTCCAAGGAAAATGGCCCAGCTAGTGCCTCTGACCAGGATGTTGCTATGACTGATGCATGCAATGCCCCAGTAAAGGTCTCAACAAGTACTAGAGCTCCAAGTTTCATTGAAGGGGTTTCTAAATCTTCATATGTGAAGCATGCATCTGACATTAAAGGTTCCTCTGTTAAGGTTGTAAATTGCCATGAGTCAGCCATCTACATTTTAGCACCTTTGCGATATGCCACTGTGTATGGATGCTCAGATTCTACAATAGTTCTGGGAGCAGTTGGGAAGGCTGTAAGGGTAGAGCATTGTGAACGAGCTCATGTGATTGTTGCAGCAAAACGTATTTGTATTGCTAATTGCCGTGAATGTGTCTTCTTTTTGGGGGTGAATCAGCAACCTCTTATTCTTGGTGATAACCATAAGTTGCAGGTGGCTCCCTATAACACATTTTACCCACAATTGGAGGAGCATATGAACGAAGTTGGAATTCTGCCTACAGTGAACCAATGGGATAATCCTATAGCACTGGGCATGGTGGATCCTCATGATTCACTATCTCACCCTGCAGGTGTTGCTGATGTTCAAGCAGAGTCCGCATCACGGGTGGATCCTGATCAGTTCACAAATTTTGTGATTCCAAACTTGTCTGAAGAGTCAACTGGATCTACAAAAGCCAACCCATTTACATTACCAGATGCTTATATGGCATCTCAGCAAAGAAATCAAAAAAATTTAGGGGAGATAAGGGAACTCTTGCGTGAAGCACCTTTAGAAGATAATCGTAAACGGGAATTGTCATCAGCTCTCCATGTGTACTTCAAGGACTGGTTATATGCTTCTGGCAATATTCGTCAGCTTTACTGTCTTCAAGGCGATTAA 1671 0.4859 MTEPIEPSTSSSMSTVFLHPRREPFEHGLLPIPKLIFSDPAQTLISLKQKLLELSSGGKVDPAAISESLQISLDHARLVLDTLSSVLPSSETEPPTAEVSAVDLHDLLLFLYIQSYKRLLPRTHKDSVAVADVWPSTSAFDGYLSALSPLQLVRSNSRRFMPSQADEEAHQLSYLQKHLANILSLLAEPVEGEGEESLVLSMDRFEHLGFLVQFGDKGSEGNSLSQHSPFFANSDPDMPAVPAPAAQVHDWLLQNITSALEHISERTSSKENGPASASDQDVAMTDACNAPVKVSTSTRAPSFIEGVSKSSYVKHASDIKGSSVKVVNCHESAIYILAPLRYATVYGCSDSTIVLGAVGKAVRVEHCERAHVIVAAKRICIANCRECVFFLGVNQQPLILGDNHKLQVAPYNTFYPQLEEHMNEVGILPTVNQWDNPIALGMVDPHDSLSHPAGVADVQAESASRVDPDQFTNFVIPNLSEESTGSTKANPFTLPDAYMASQQRNQKNLGEIRELLREAPLEDNRKRELSSALHVYFKDWLYASGNIRQLYCLQGD* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0977 556 ProSiteProfiles C-CAP/cofactor C-like domain profile. 291 427 IPR017901 -
Ahy6g0977 556 Pfam Tubulin binding cofactor C 321 436 IPR012945 -
Ahy6g0977 556 PANTHER UNCHARACTERIZED 3 556 IPR039589 -
Ahy6g0977 556 PANTHER CYCLASE-ASSOCIATED PROTEIN CAP/SEPTUM FORMATION INHIBITOR MINC-RELATED 3 556 - -
Ahy6g0977 556 Gene3D - 302 459 IPR016098 -
Ahy6g0977 556 SMART carp 329 366 IPR006599 -
Ahy6g0977 556 SMART carp 367 401 IPR006599 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0977 Ahy-Chr6 12875468 12881086 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0977 K16810 - gmx:100800780 940.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0354 16 7050861 7056499 Ahy6g0977 6 12875468 12881086 hybridization