Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0939 ATGGGTATTGCAGCTGCTGCTGTGGTTGTGCCATTTGGCCTCCTCTTCTTCACTTCAGGCCTCGCTGTTAATCTCATTCAGGCAGTATCTTATGTTCTTGTACGGCCTCTGTCAAAGAATCTGCACAGGCGGATCAACCGTGTAGTTGCAGAATTGTTGTGGCTGGAACTTGTATGGCTTATTGATTGGTGGGCTGGTGTTAAGGTTGAAGTATTCACAGATCATGAAACGTTCCAATTGATGGGTAAAGAGCATGCCCTTGTCATATGCAATCACAGAAGCGATATTGATTGGCTTGTTGGATGGGTTTTAGCTCAGCGCTCAGGTTGCCTTGGCAGTACTTTAGCTGTGATGAAGAAATCTTCAAAGTTTCTGCCGGTCATTGGTTGGTCAATGTGGTTTTCTGAGTATCTTTTCCTAGAGAGAAGCTGGGCCAAGGATGAAAGCACATTAAAGTCAGGCATCCAGCGACTGAGCGATTTTCCTCTTCCGTTTTGGTTGGCTCTCTTTGTAGAAGGAACACGCTTCACACAAGCTAAACTATTAGCTGCTCAAGAATATGCAGCCTCTGCTGGATTGCCTATTCCTAGAAATGTTTTGATTCCTAGAACTAAGGGATTTGTTTCAGCAGTAAGTCACATGCGCTCATTTGTTCCTGCCATTTATGACGTAACAGTGGCTATCCCCAAGTGTTCACCCACCCCTACAATGCTTAGACTCTTAAAAGGGCAACCCTCAGTGGTGCAAGTTCACATCAAGCGCCATTTGATGAATGAATTGCCAGAAACAGATGAAGCTGTTGCTCAATGGTGTCGAGATGTATTTGTTGCCAAGGATGCATTATTAGACAAACATATAGCTGAAGATACTTTTAGTGATAAAGAGCTGCAGGATACTGGTCGGCCAAAAAAATCTCTTCTGGTAACCATATCTTGGTCTGGTCTGATTGTTACGGGAGCCGTCAAGTTTCTCCGATGGACTTCGCTACTATCATCCTGGAAGGGTATTGCAATTTCAACTGCTAGTTTGGCAGTCGTTACTGGCCTCATGCAAATCTTGATTATGTTCTCACAGTCGGAGCGTTCAACGCCAGCCAAGGTCCTCCCTGCAAAGCCAAAGAGCACAGGGGAACAAGTGGAGGATAAGAATGTCAAACAACAGTAG 1164 0.4493 MGIAAAAVVVPFGLLFFTSGLAVNLIQAVSYVLVRPLSKNLHRRINRVVAELLWLELVWLIDWWAGVKVEVFTDHETFQLMGKEHALVICNHRSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERSWAKDESTLKSGIQRLSDFPLPFWLALFVEGTRFTQAKLLAAQEYAASAGLPIPRNVLIPRTKGFVSAVSHMRSFVPAIYDVTVAIPKCSPTPTMLRLLKGQPSVVQVHIKRHLMNELPETDEAVAQWCRDVFVAKDALLDKHIAEDTFSDKELQDTGRPKKSLLVTISWSGLIVTGAVKFLRWTSLLSSWKGIAISTASLAVVTGLMQILIMFSQSERSTPAKVLPAKPKSTGEQVEDKNVKQQ* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0939 387 MobiDBLite consensus disorder prediction 362 387 - -
Ahy6g0939 387 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-LIKE PROTEIN 7 376 - -
Ahy6g0939 387 SMART plsc_2 86 208 IPR002123 GO:0016746
Ahy6g0939 387 Pfam Acyltransferase C-terminus 239 312 IPR032098 -
Ahy6g0939 387 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 7 376 - -
Ahy6g0939 387 CDD LPLAT_LCLAT1-like 62 253 - -
Ahy6g0939 387 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 38 284 - -
Ahy6g0939 387 Pfam Acyltransferase 80 228 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0939 Ahy-Chr6 12246485 12252441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0939 3 375 Miscellaneous Gene Families AT3G57650 78.016 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0939 K13523 - gmx:100812696 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0385 16 7478025 7483970 Ahy6g0939 6 12246485 12252441 hybridization
Ahy6g0939 6 12246485 12252441 Ahy12g1591 12 85933631 85940427 PCT
Ahy6g0939 6 12246485 12252441 Ahy2g1348 2 70544786 70551966 PCT
Ahy12g1591 12 85933631 85940427 Ahy6g0939 6 12246485 12252441 PCT
Ahy2g1348 2 70544786 70551966 Ahy6g0939 6 12246485 12252441 PCT