Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0904 ATGGCCACTACCACCACCGCACCTCACTGTCTCTACCAACTCGGGGGCACCGCCGCCGCTGAGTCAACTCGCATGCAAAGCGCCATCTTTTGCAAGAAAAAATCCAGTAAGACGGCATTCGAGGAGACAAAGCAGGGCTTCGTGGACTACGACCGCGGCCAGCACGACGTCTCCGACAGGCTCTCCGGCCTCCGGAAGGACGACATCCCCGGCCGCTACCGCGTCCGAGTCGCCGGAGACCGATTCCAGAGAGACTGGACCGTCTCGGAGGTCGTCGACCAGGTCCTCGCCCTCACTCCTCGCGATGACATCGACGGACTACTGAACCGCTGGGTTGGGCGCTTCGCACGCAAGAATTTCCCTTACCTCATTAGAGAGTTGACGCAGAGAGGGTCGATTGAACACTGCATCGCAGTGTTCCGGTGGATGAAGAACCAGAAGAACTACTGTGCGCGTAATGATATATACAACATGATGATTAGGTTGCATGCTAGGCATAACCGAACTGACCAGGCGCGTGGATTGTTCTTTGAGATGCAAGAATGGAGGTGTAAACCTGATGCTGAGACTTATAATGCTCTTATCAATGCGCATGGTCGAGCTGGACAGTGGCGTTGGGCGATGAATATCATGGATGACATGCTGCGAGCTGCTATTCCGCCAAGCCGGTCAACCTATAACAACTTGATAAACGCCTGTGGCTCTAGTGGAAATTGGAAAGAAGCACTTAATGTTTGCAAGAAAATGACAGACAATGGAGTTGGGCCTGATCTTGTTACACACAATATTGTGTTATCTGCATTTAAAAGTGGGGCTCAGTATTCAAAAGCTCTGTCTTATTTTGAACTAATGAAGGGAACTCACATTCGTCCTGACACAACTACCCTTAACATTATTATCCATTGTCTTGTGAAGCTTCAACAGTATGACAAAGCCATCGATATTTTCAATTCCATGAGGAAAAATAAGTCAGATTGTCGTCCTGATGTTGTAACTTTTACTAGCATCATACACTTGTATTCTACATGTGGGCAAGTTGAAAATTGCGTGGCTGCATTTAATATGATGCTTGCAGAAGGGCTGAAACCCAACACAATCTCATATAATTCACTAATTGGTGCATATGCTGCTTGCGGGATGGACAAGGAGGCACTTGTGGTTTTCAATGAGATCAAACAAAATGGTTTCCGGCCAGATATTGTGTCCTATACATCTTTGCTTAATGCTTATGGAAGATCACAAAAGCCTCAAAAAGCAAGAGAAATATTTGCAATGATAAAGAAAAACAGATTGAAGCCTAACATTGTTACTTACAATGCACTAATTGATGCCTACGGATCTAATGGTTTGTTGGCGGAGGCAATTGAAATATTGCGTGAGATGGAGCAAGATGGAATTTATCCAAATGTTGTCTCAATATGCACTCTCTTGGCTGCCTGTGGGCAGTGCAGTCAGAAGGTGAAGATTGATACAATCCTATCAGCAGCTGAGATGCGAGGCATTAAATTGAATACAGTTGCCTATAATTCAGCTATAGGAGCCTATATGAATGTGGGGAAATATGACAAAGCTGTAGGCTTGTATAAATCTATGAGGAAGAAAAATATAAAACCTGATTCTGTTACTTGCACTGTGTTGATAAGTGGTTGTTGTAATATGTCAAAATATAGTGAAGCTCTAGTTTTCATGGAAGAAATGATGCATCTTAGACTTCCTTTGACCAAAGAGGTCTACTCTTCTGCCATATGTGCTTACAGCAAACTGGGACAAGTCATAGAAGCAGAATCCACATTTAACTTGATGAAATCATCTGGTTGCTATCCTGATGTAGTGGCATATACTGCAATGCTTGATGCATACAATGCAGGAGAGAATTGGGAAAAAGCATATGCACTCTTTGAAGAAATGGAAGTGAATGGCATCAAGCTAGATACGATTGCATGTGCTGCCCTGATGAGAGCCTTTAATAAAGGTGGTCAACCAGGAAGGGTCCTCAGTCTTGCAGAAAGTATGAGAGAAAAAGATATTCCTTTCAGTGATACCATTTATTTTGAAATGGTATCTGCCTGTAGCTTATTGCATGATTGGAGGACAGCGGTTGATATCATGAAGTACATAGAGCCCTCACTTCCTGTAATTTCGTCTGGATGCTTGAACCTTTTCCTCAAATTTTTAGGAAAAAGTGGAAAGATTGAAACTATGTTGAAGTTATTCTACAAGATGTTGGCATCGGGTGCTGATATTAACCTCAACACTTATTCTGTTATATTGAAAACCCTCTTATCCTCTGGAAACTGGAGGAAATATTTAGAGGTACTACAATGGATGGAGGATTCAGGAATTCAACCATCAAACGAAATGTACCATGATATATCCTCCTATTCACAAAGATGTGTTGGGGCTGAGAATGCTGCAGTGGTAAAAGAAAGACTTGAATCCGTGAAGGGAAAATCCAGGGAACGAATTTCTCCAAGTCAATCACGTGAGTCCACTGCACTCAGCTCACCCTTGTTTTCGAATTAG 2523 0.434 MATTTTAPHCLYQLGGTAAAESTRMQSAIFCKKKSSKTAFEETKQGFVDYDRGQHDVSDRLSGLRKDDIPGRYRVRVAGDRFQRDWTVSEVVDQVLALTPRDDIDGLLNRWVGRFARKNFPYLIRELTQRGSIEHCIAVFRWMKNQKNYCARNDIYNMMIRLHARHNRTDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIVLSAFKSGAQYSKALSYFELMKGTHIRPDTTTLNIIIHCLVKLQQYDKAIDIFNSMRKNKSDCRPDVVTFTSIIHLYSTCGQVENCVAAFNMMLAEGLKPNTISYNSLIGAYAACGMDKEALVVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKAREIFAMIKKNRLKPNIVTYNALIDAYGSNGLLAEAIEILREMEQDGIYPNVVSICTLLAACGQCSQKVKIDTILSAAEMRGIKLNTVAYNSAIGAYMNVGKYDKAVGLYKSMRKKNIKPDSVTCTVLISGCCNMSKYSEALVFMEEMMHLRLPLTKEVYSSAICAYSKLGQVIEAESTFNLMKSSGCYPDVVAYTAMLDAYNAGENWEKAYALFEEMEVNGIKLDTIACAALMRAFNKGGQPGRVLSLAESMREKDIPFSDTIYFEMVSACSLLHDWRTAVDIMKYIEPSLPVISSGCLNLFLKFLGKSGKIETMLKLFYKMLASGADINLNTYSVILKTLLSSGNWRKYLEVLQWMEDSGIQPSNEMYHDISSYSQRCVGAENAAVVKERLESVKGKSRERISPSQSRESTALSSPLFSN* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0904 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 539 573 IPR002885 -
Ahy6g0904 840 Gene3D Tetratricopeptide repeat domain 250 320 IPR011990 GO:0005515
Ahy6g0904 840 Gene3D Tetratricopeptide repeat domain 393 463 IPR011990 GO:0005515
Ahy6g0904 840 Gene3D Tetratricopeptide repeat domain 464 569 IPR011990 GO:0005515
Ahy6g0904 840 Gene3D Tetratricopeptide repeat domain 570 639 IPR011990 GO:0005515
Ahy6g0904 840 Gene3D Tetratricopeptide repeat domain 88 249 IPR011990 GO:0005515
Ahy6g0904 840 Gene3D Tetratricopeptide repeat domain 321 392 IPR011990 GO:0005515
Ahy6g0904 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 329 363 IPR002885 -
Ahy6g0904 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 222 256 IPR002885 -
Ahy6g0904 840 MobiDBLite consensus disorder prediction 825 840 - -
Ahy6g0904 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 364 398 IPR002885 -
Ahy6g0904 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 152 186 IPR002885 -
Ahy6g0904 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 257 291 IPR002885 -
Ahy6g0904 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 574 608 IPR002885 -
Ahy6g0904 840 PANTHER OS07G0213300 PROTEIN 27 792 - -
Ahy6g0904 840 Pfam Pentatricopeptide repeat domain 737 785 IPR002885 -
Ahy6g0904 840 Pfam Pentatricopeptide repeat domain 245 304 IPR002885 -
Ahy6g0904 840 Pfam Pentatricopeptide repeat domain 453 482 IPR002885 -
Ahy6g0904 840 Pfam Pentatricopeptide repeat domain 387 448 IPR002885 -
Ahy6g0904 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 434 468 IPR002885 -
Ahy6g0904 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 504 538 IPR002885 -
Ahy6g0904 840 SUPERFAMILY TPR-like 186 358 IPR011990 GO:0005515
Ahy6g0904 840 Pfam PPR repeat 155 184 IPR002885 -
Ahy6g0904 840 Pfam PPR repeat 577 606 IPR002885 -
Ahy6g0904 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 292 326 IPR002885 -
Ahy6g0904 840 PANTHER RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED 27 792 - -
Ahy6g0904 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 609 643 IPR002885 -
Ahy6g0904 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 749 783 IPR002885 -
Ahy6g0904 840 MobiDBLite consensus disorder prediction 814 840 - -
Ahy6g0904 840 TIGRFAM PPR: pentatricopeptide repeat domain 190 222 IPR002885 -
Ahy6g0904 840 TIGRFAM PPR: pentatricopeptide repeat domain 259 293 IPR002885 -
Ahy6g0904 840 TIGRFAM PPR: pentatricopeptide repeat domain 577 610 IPR002885 -
Ahy6g0904 840 TIGRFAM PPR: pentatricopeptide repeat domain 155 188 IPR002885 -
Ahy6g0904 840 TIGRFAM PPR: pentatricopeptide repeat domain 436 470 IPR002885 -
Ahy6g0904 840 TIGRFAM PPR: pentatricopeptide repeat domain 331 365 IPR002885 -
Ahy6g0904 840 TIGRFAM PPR: pentatricopeptide repeat domain 366 400 IPR002885 -
Ahy6g0904 840 TIGRFAM PPR: pentatricopeptide repeat domain 541 569 IPR002885 -
Ahy6g0904 840 TIGRFAM PPR: pentatricopeptide repeat domain 611 645 IPR002885 -
Ahy6g0904 840 TIGRFAM PPR: pentatricopeptide repeat domain 506 540 IPR002885 -
Ahy6g0904 840 TIGRFAM PPR: pentatricopeptide repeat domain 295 323 IPR002885 -
Ahy6g0904 840 TIGRFAM PPR: pentatricopeptide repeat domain 401 435 IPR002885 -
Ahy6g0904 840 TIGRFAM PPR: pentatricopeptide repeat domain 225 257 IPR002885 -
Ahy6g0904 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 187 221 IPR002885 -
Ahy6g0904 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 399 433 IPR002885 -
Ahy6g0904 840 Pfam PPR repeat family 608 655 IPR002885 -
Ahy6g0904 840 Pfam PPR repeat family 186 233 IPR002885 -
Ahy6g0904 840 Pfam PPR repeat family 328 376 IPR002885 -
Ahy6g0904 840 Pfam PPR repeat family 504 552 IPR002885 -
Ahy6g0904 840 Gene3D Tetratricopeptide repeat domain 656 834 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0904 Ahy-Chr6 11627501 11632607 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0904 329 792 Glycosyltransferase AT1G05670 22.845 2.28e-35 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0904 - - ahf:112696020 1691.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0424 16 8105823 8111378 Ahy6g0904 6 11627501 11632607 hybridization