Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0889 ATGGAAACCAAGCCATTTGAGGAACCTTCTTCCACCGACGATGAGGTCTACTTGCAAAATGCAAGTGATGAAGATGATAATGAGAGTGCCTTTTCCTCCAGTTCCAACACCAAGTTACAGTTCAGGTACGTGAAATCCAAAGCTGTTTGGAATGATGAGATGGGAATGGCTGAAGTCATTGAAAATCGTGGCAAAACATGGGTCACAACTGGGATAGTTCGAAGTGGCAAGGTTTATTCTTCCATTGAGGAGTCTTTGTATTTGATGGAGATAGGAGCCTTAGATCTCTTAGATGATTGTGAAAGAAGCATGTCCCTAATGGATATGTATGAAAAGATTGCTGGAGGTAAGAGTGGGTGTTGCTGGGAAATGTTTGAGGTTTACAGGCACCTCAAGTCTCTTGGCTACATAGTTGGGCGGCACGGCGTTGCTTGGAGTTTGAAGGGAATTAAAAGTTCCCATAAGGCTGTTGATGTTGCCGAAGAAACTGAACAAGGAGTAGACTTGATGAGCTCCAAATCCGAGCTTTCCATCAATAAGTTATTAAGTGAGATGCAGATTAATGGTTCAAGGCCAGATTTCGATGTTTATCTTCCAAACAGTAGGTTTAGAAAGTCTTCGCCGGGTGATCCTAGTTTTCTGCTATACTTATCTCGGGGTGATCCACCATCTAAAGCAGAAACAGAAGCTCTTGAAAAACAATGTGGTGGCCTTCCTTTGAAGATTGGCTTAGTCACGGAGGGACGGGTCAGTTTCTTTTCCTTTGACAAGGTGGAACTTCCTCTTCTACCCTGA 795 0.434 METKPFEEPSSTDDEVYLQNASDEDDNESAFSSSSNTKLQFRYVKSKAVWNDEMGMAEVIENRGKTWVTTGIVRSGKVYSSIEESLYLMEIGALDLLDDCERSMSLMDMYEKIAGGKSGCCWEMFEVYRHLKSLGYIVGRHGVAWSLKGIKSSHKAVDVAEETEQGVDLMSSKSELSINKLLSEMQINGSRPDFDVYLPNSRFRKSSPGDPSFLLYLSRGDPPSKAETEALEKQCGGLPLKIGLVTEGRVSFFSFDKVELPLLP* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0889 264 Pfam tRNA-splicing endonuclease subunit sen54 N-term 35 97 IPR024336 -
Ahy6g0889 264 PANTHER TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54 6 264 IPR024337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0889 Ahy-Chr6 11333561 11339699 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0889 K15326 - vvi:100257347 284.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0443 16 8346385 8353283 Ahy6g0889 6 11333561 11339699 hybridization