Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0883 ATGGTTGGGAGTATAATGGGGAGGTTTAGAAATAGCAATGGTACATTAGCGTATGAAAATGGATCTGTTCAGAATGGTGGATGTTTATCAGAGGAGAAGCTTGATGAACTTAGGAAGTTGATTGGAAAATCAGAGGGTGATCCTCTGAGAATTGTTAGTGTAGGAGCAGGTGCATGGGGGAGTGTGTTTGCAGCATTGCTTCAAGACAGTTATGGGCAATTCAGGGACAAGATACAGATTAGGATATGGAGGAGGGCAGGCAGGGCAGTGGACAGGGCGACGGCCGAGCACCTCTTCGAGGTCATTAACTCGAGGGAAGACGTGCTGCGCCGGCTGATCCGGCGATGCGCTTACCTTAAATATGTGGAGGGGAGGCTAGGGGATAGGACATTGTTTGCTGATGAGATTCTGAAGGATGGTTTTTGCTTGAACATGGTTGACACACCCCTTTGTCCCTTGAAAGTTGTTACTAATTTGCAGGAAGCTGTTTGGGATGCTGATATTGTTGTTAATGGATTGCCTTCAACTGAGACAAGGGAGATTTTTGAAGAGATTAGTGAGTATTGGAAGGAGAGGATCACAGTTCCTATTATAATCTCTTTGGCTAAGGGTATTCAAGCTGCATTGGACCCTGTTCCTCATATTATTACTCCTACTAAGATGATTCACCAAGCAACTGGAGTTTCTATGGAGAACATACTCTATCTTGGGGGTCCAAATATTGCATCAGAAATATACAACAAGGAGTATGCCAATGCAAGAATTTGTGGTGCTGAGAAATGGAGGAAGCCTCTTGCAAAGTTTCTAAGACAACCCCATTTTATTGTGTGGGACAACAGTGACCTTGTCACTCATGAAGTCATGGGAGGCTTGAAAAATGTCTATGCAATTGGAGCTGGTATGGTAGCAGCACTAACCAATGAGAGTGCAACAAGCAAATCTGTATACTTTGCACACTGCACATCAGAGATGATCTTCATTACTCACTTGTTGGCTGAAGAGCCTGAAAAGCTTGCAGGACCATTGTTGGCTGATACATATGTGACTCTCTTAAAAGGGCGTAATGCATGGTATGGTCAAATGTTAGCAAAAGGTCAACTAAGCCCTGACATGGGTGACAGCATTAGTGGCAAAGGAATGATACAGGGAGTGTCTGCAGTGGAAGCATTCTTTGAGCTTCTGAGCCAATCAAGCTTGAATGTGTTGCATCCTGAAGAAAACAAGCCTGTTGCTCCTGTAGAGCTTTGCCCTATCTTGAAGACACTCTACAAAATATTGATATCGAGAGAACTATCATCACAAGCAATTCTGAAAGCTCTGAGGGATGAAAATCTGAATGATCCCAGGGAACGCATTGAGATTGCACAGAGCCATGTTTTCTACAGGCCTTCACTTCTTGGACAGCCATGA 1410 0.4404 MVGSIMGRFRNSNGTLAYENGSVQNGGCLSEEKLDELRKLIGKSEGDPLRIVSVGAGAWGSVFAALLQDSYGQFRDKIQIRIWRRAGRAVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEGRLGDRTLFADEILKDGFCLNMVDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISEYWKERITVPIIISLAKGIQAALDPVPHIITPTKMIHQATGVSMENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGQLSPDMGDSISGKGMIQGVSAVEAFFELLSQSSLNVLHPEENKPVAPVELCPILKTLYKILISRELSSQAILKALRDENLNDPRERIEIAQSHVFYRPSLLGQP* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0883 469 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 281 430 IPR006109 GO:0004367|GO:0005975
Ahy6g0883 469 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 153 255 IPR011128 GO:0016616|GO:0046168|GO:0051287
Ahy6g0883 469 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)] 1 469 - -
Ahy6g0883 469 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 274 298 IPR006168 GO:0004367|GO:0006072|GO:0009331
Ahy6g0883 469 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 53 70 IPR006168 GO:0004367|GO:0006072|GO:0009331
Ahy6g0883 469 Gene3D - 281 441 IPR013328 GO:0016491
Ahy6g0883 469 Gene3D - 147 277 - -
Ahy6g0883 469 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 281 430 IPR008927 -
Ahy6g0883 469 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 50 281 IPR036291 -
Ahy6g0883 469 Gene3D - 31 112 - -
Ahy6g0883 469 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 1 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0883 Ahy-Chr6 11278756 11281558 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0883 1 469 Acyl Lipid Metabolism Gene Families AT2G41540 86.780 0.0 821
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0883 K00006 - gmx:100810871 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0448 16 8392055 8394822 Ahy6g0883 6 11278756 11281558 hybridization
Ahy6g0883 6 11278756 11281558 Ahy12g1491 12 76331918 76337187 PCT
Ahy12g1491 12 76331918 76337187 Ahy6g0883 6 11278756 11281558 PCT