Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0875 ATGGCATTTCTAACTCGCCTCCATTCCTTCGCAAGGCCCTTCTCCTCTCTCCTCTCCACCTCGCGCCAGAGTGGAGGTAGAGCAATAATGACCAAGATTGGCATGAACATGTGCTCGCTTTCTCCAGCTGTTTCAACTGAAGCCTCAGATTTAGAATTTGAAGTGATCCATGATGATGTCAAAGCAACAGAAAAAGATGATGCACTTCGCTTGGCTGTCTCACAGCTTGCTAATGAGTTTAGTGAGGAATCCATGTTATCTTTGCAGAAGTTTTTCGGTGTGCGCCGCGCTCAAGTGATATCTACGGGCTCCTTGAAGCTTGACATAGCTCTTGGAATGGGAGGATTGCCAAAGGGTAGGATTGTTGAAATTTATGGACGAGAAGCAGCTGGCAAGACAACACTTGCACTTCAAGTTATTAAAGAAGCTCAAAAGCATGGAGGATATTGTGCATATCTTGATGTAGAGAATGCATTGGATGCTTCACTTGTGGAATCAATAGGTGTGAATACCGAAAAACTTCTTGTCTCGCATCCAGATTGTGCTGAAAATGTGTTGAGCATGGTTGATACATTAACGAAAAGTGGAGCTGTAGATGTGATTGTGATTGATAGTGTTGCTGCCCTTCTACCCAAGCGTGAACTTGATCAGTTAGGTGTTAGCACCAAACTAGATTTACAACCCCGACTGATGACCCAAGCACTGCGGAAAATTCAGTATTCATTATCACATTCACAAACTCTTATCATTTTTGTTAATCAGATTAGATTTAGTCCAAAATCAGCTAAGGGATGTGGACCTGCAGAAGAGGTCACTTGTGGTGGAAATGCTTTGAGATTCTATGCTGCTGTTCGATTGAGACTTTCGAGAATGGGATTGATCAAAACTGATGATAAGGTGGAGGGTCTTCGGGTCTGTGTGCAAGTGGCGAAAAATAAGCTAGCACCAGCAGCACTCAAAAAGGCTGAACTAGGCATCAAGTTTGGAGGAGGCTTTTGCCAAGAAGCAGAGGTCTTAGATTTGGCTTGTGAACATGGAATGATTGTAAAAGACGAGGAAAGCTACCTTATAGAAGGAAATACTTTCGATACTAGAAAAGCGGCCGAAGTGCATTTGGCAGAGGATGACAGCGTCTTTGACAAGTTGGTAAGGGACTTGAGAAGGCTATATTTTTGA 1176 0.4328 MAFLTRLHSFARPFSSLLSTSRQSGGRAIMTKIGMNMCSLSPAVSTEASDLEFEVIHDDVKATEKDDALRLAVSQLANEFSEESMLSLQKFFGVRRAQVISTGSLKLDIALGMGGLPKGRIVEIYGREAAGKTTLALQVIKEAQKHGGYCAYLDVENALDASLVESIGVNTEKLLVSHPDCAENVLSMVDTLTKSGAVDVIVIDSVAALLPKRELDQLGVSTKLDLQPRLMTQALRKIQYSLSHSQTLIIFVNQIRFSPKSAKGCGPAEEVTCGGNALRFYAAVRLRLSRMGLIKTDDKVEGLRVCVQVAKNKLAPAALKKAELGIKFGGGFCQEAEVLDLACEHGMIVKDEESYLIEGNTFDTRKAAEVHLAEDDSVFDKLVRDLRRLYF* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0875 391 PANTHER DNA REPAIR PROTEIN RECA HOMOLOG 2, MITOCHONDRIAL 19 391 - -
Ahy6g0875 391 ProSitePatterns recA signature. 277 285 IPR020584 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Ahy6g0875 391 ProSiteProfiles RecA family profile 1. 96 255 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Ahy6g0875 391 SMART AAA_5 118 292 IPR003593 -
Ahy6g0875 391 Pfam recA bacterial DNA recombination protein 68 332 IPR013765 GO:0003697|GO:0005524|GO:0006281
Ahy6g0875 391 ProSiteProfiles RecA family profile 2. 266 337 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Ahy6g0875 391 PANTHER RECA 19 391 IPR013765 GO:0003697|GO:0005524|GO:0006281
Ahy6g0875 391 Gene3D - 95 388 IPR027417 -
Ahy6g0875 391 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 319 IPR027417 -
Ahy6g0875 391 PRINTS RecA protein signature 226 255 IPR013765 GO:0003697|GO:0005524|GO:0006281
Ahy6g0875 391 PRINTS RecA protein signature 274 302 IPR013765 GO:0003697|GO:0005524|GO:0006281
Ahy6g0875 391 PRINTS RecA protein signature 154 183 IPR013765 GO:0003697|GO:0005524|GO:0006281
Ahy6g0875 391 PRINTS RecA protein signature 188 217 IPR013765 GO:0003697|GO:0005524|GO:0006281
Ahy6g0875 391 PRINTS RecA protein signature 308 337 IPR013765 GO:0003697|GO:0005524|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0875 Ahy-Chr6 11102494 11106129 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0875 - - aip:107645515 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0457 16 8570421 8574069 Ahy6g0875 6 11102494 11106129 hybridization