Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0843 ATGATTTCTTCATCCATCTCTCTCAGACCCTTCCTTCACTCCCTTGTCCTTCATCACCACCATCAGAGAACAACTGCTTCAAACAGTTGGGCCTGCTTGGCTTTTGAGAATTCAGCAAATTTCGGCACACAGAGAGTGATTTTTGCAAAGGGTTTCAGGCTGAATTGCTTGGTTGATAAAGTGATGGATGGGACCACATCATCTTTGGTGAATGATGCAGTGGATTGTTTTGCTGAAGAGGAAATTTTGGAGCCTAATATCTCAACATTGGTTATGAATTTCGAGAATAAGTCTGATCCTTTTGGAGCAGTCAGTAATCCGCTCTATCAGACTGCTACTTTTAAGCAGCCTAATGCAATAGAAAATGGTCCCTATGATTATACCAGAAGTGGAAATCCCACTCGAGATGCTTTAGAAAGTTTGTTGGCGAAACTTGATAAGGCGGATAGAGCCCTATGCTTCACCAGTGGAATGGCTGCTCTGAGTGCTGTTTCTCATCTTGTTCAAGCTGGTGAGGAAATTGTTGCTGGAGATGATCTATATGGTGGAACAGACAGGTTGCTGTCCCGAGTAACTCCAAAGCATGGCATTGTGGTCAAACGGGTAAATACAACTGATCTTAATGAGGTTGCATCTGCTATTGGACCCCGGACTAAGCTTGTGTGGCTTGAGAGCCCAACCAATCCTCGAATACAAATTACTGATATTCGAAAAATATCTGAGATGGCTCATGCACATGGTGCTCTGGTGTTGGTGGATAATAGTATAATGTCACCTGTGTTGTCTCGGCCATTAGAACTTGGAGCAGATATTGTTATGCACTCAGCTACCAAATTTATTTCTGGACATAGCGATATTATGGCTGGTGTGCTTGCTGTGAAAGATGAAAGGTTGGGAAAAGAGTTATATTTCTTGCAAAATGCAGAGGGTTCAGGCTTGGCTCCATTTGACTGTTGGCTCTGTATGCGAGGAATCAAGACGATGTCCCTGCGAGTTGAGAAACAACAGGATAATGCTCAGAAGATTGCCGAGTTCCTTGCCTCCCATCCTCTAGTGAAGAAAGTAAACTATGCTGGTCTGCCTGATCATCCTGGACACGATTTACACTACTCGCAGGCAAAAGGTGCAGGATCTGTGCTTAGCTTTTTAACAGGTTCCCTGGCACTCTCAAAGCATATTGTTGAAACTACCAAGTACTTCAGCATAACTGTCAGTTTCGGAAGTGTGAAGTCCCTCATCAGTTTGCCGTGTTTCATGTCGCACGCAAGCATACCATCGGCGGTTCGTGTGGAAAGAGGCTTAACCGAAGATCTAGTGCGCATATCTGTGGGGATTGAGGATGTGAATGATCTCATTTCTGATCTAGACAATGCCCTTAGAACTGGCCCTGTGTAA 1395 0.4423 MISSSISLRPFLHSLVLHHHHQRTTASNSWACLAFENSANFGTQRVIFAKGFRLNCLVDKVMDGTTSSLVNDAVDCFAEEEILEPNISTLVMNFENKSDPFGAVSNPLYQTATFKQPNAIENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALSAVSHLVQAGEEIVAGDDLYGGTDRLLSRVTPKHGIVVKRVNTTDLNEVASAIGPRTKLVWLESPTNPRIQITDIRKISEMAHAHGALVLVDNSIMSPVLSRPLELGADIVMHSATKFISGHSDIMAGVLAVKDERLGKELYFLQNAEGSGLAPFDCWLCMRGIKTMSLRVEKQQDNAQKIAEFLASHPLVKKVNYAGLPDHPGHDLHYSQAKGAGSVLSFLTGSLALSKHIVETTKYFSITVSFGSVKSLISLPCFMSHASIPSAVRVERGLTEDLVRISVGIEDVNDLISDLDNALRTGPV* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0843 464 ProSitePatterns Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 270 284 IPR000277 GO:0019346|GO:0030170
Ahy6g0843 464 PANTHER TRANS-SULFURATION ENZYME FAMILY MEMBER 39 464 IPR000277 GO:0019346|GO:0030170
Ahy6g0843 464 CDD CGS_like 102 460 IPR000277 GO:0019346|GO:0030170
Ahy6g0843 464 SUPERFAMILY PLP-dependent transferases 95 460 IPR015424 -
Ahy6g0843 464 PIRSF CGS 79 462 IPR000277 GO:0019346|GO:0030170
Ahy6g0843 464 Pfam Cys/Met metabolism PLP-dependent enzyme 89 459 IPR000277 GO:0019346|GO:0030170
Ahy6g0843 464 Gene3D - 86 327 IPR015421 GO:0003824
Ahy6g0843 464 Gene3D Aspartate Aminotransferase, domain 1 328 461 IPR015422 GO:0003824
Ahy6g0843 464 PANTHER BNAC04G24570D PROTEIN 39 464 - -
Ahy6g0843 464 TIGRFAM cysta_beta_ly_E: cystathionine beta-lyase 88 461 IPR006238 GO:0004121|GO:0071266
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0843 Ahy-Chr6 10561573 10565687 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0843 K01760 - gmx:100812354 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0491 16 9096917 9100941 Ahy6g0843 6 10561573 10565687 hybridization