Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0821 ATGTGGGCTCTTCGTCGAGCTTCTCTTCCTCTCAGGAATCGAGGATTTAATGTGAGAGCTTCTTGCATCAAATCAGTTTCGGGTACTTGGGTGGAAGATGATTCTAGGACGTTGGACTCATCTAGAATGGCATATGGTCATTTTTTGTTGCCGAATATGTTCTACCATTCTGGGTATGCCTCACTGAAATTCACCGTGAGTAGGCGCGAACTTTCTTCGCAAGCTGATGCCAGTAGCACGAAAGATCAGGATGATTTGGAGGATGGGTTTTCCGAGCTTGAGACACCAGCTGCTGAATCTGAATATGGTAAAGACGAATTCAATGATATTAAAGATGGTGAGGAGCCACGCGAGGAGTTGGAGTTTTCAGACACTGAGGTTGAACCAAGTGAGAAAAAAGGACGTCGACGAGCTCAGTCAGAAATTTTCAAATTGATTGATAATTCTCCAACTACTTCTGTTCAAGTGCTTATGGATAAGTGGGTTGAAGAAGGGAAAGAACTAAGCAGACAAGATATCTCACTAGCCATGGTTAATCTTCGGAGGCGCAAACTGTATTTTAAAGCTTTTCAGCTCTCAGAGTGGGTTGTATCAAAAAGTCAGCTTGAGGTTACTGAGAAAGATCATGCTACCCGTGTTGATTTGATTGCTAAATTGCGTGGGTTACATGAAGCAGAGATGTACATTGAGCGTATTCCAGAATCTTTTAAAGGAGAGACAGTATATCAAACCCTTTTAGCAAGTTGTGTTGCTCAGAACAATTTGAAGAAAGCAGAGGAAACTTTCAACAAAATGAAGGATTTGAAATTCCCTCTTACATCATATGTTTGGAATCAGTTGCTTCTTCTGTATAAGAGGCATGACAAGAAGAAAATAGCCGATGTATTGTTGATGATGGAAAATGAGAATGTCAAACCTTCTCCTTTTACTTATAAAATATTAATAGACGCAAAAGGCCAGTCCAAAGATATTGATGGCATGGATCTAATTGTTGAGAAAATGAAGGCTCAAGGGATTGAACCAGACATCCGAACAAAAGCAGTTTTGGTTGGACACTACAAAACTGCTGGGCTTGAAAAAAAAGCCGAAGATATGTTGAAGGAAATGGAAGGTGAAAATTTGAAAGAGAATTCTTGGCTTGGTCGATATTTGCTTCCTCTATACGCAAATCTGGGTAAGGCTGATGAAGTGGGAAGAATTTGGGAGGTCTGTCAGGCTTCCCCTCGAATTGAAGATTGTCTTGCTGCGATTGAAGCTTTTGGAAAGTTGAAGAAAATTGATGAAGCAGAGGCTGTTTTCGAAATGATATCAAAGAGGTGGAAGCTTTCTTCCAAGAACTACTCAGTCATGCTGAAGGTTTATGCAAATAATAAGATGCTAGCAAAGGGCAAAGATCTCATTAAGCGAATGGCAGAGAGCGGGTGTCAAATAGGCCCATTGACATTGGACGACCTAGTGAAACTTCACATCCAAGCAGGGGAAGTGGAGAAGGCAGACACTATTCTGCAAAAGGCTATCATGCAAAACCAGTTGAAACCATTAATCATTTCTTATATTGCTATTATGGAGCAGTATGCTAAGAGGGGCGACGTCCATAATTCAGAAAAGATTTTGCACAAAATGAAACAAGCTGGCTACACGATTCGTCTGAGGCAATACCAAATTCTCCTACAGGCCTATATAAATGCCAAGCTTCCGGCCTATCGGATTAGGGACAGCATGAAGGCTGATAACGTATTACCCAACAGGGATTTTGCAAATCTGTTGGCTCAAGTTGATGGTTTTAGGAAGAATCCAGCTTCTGATTTGCTTGATTGA 1818 0.4109 MWALRRASLPLRNRGFNVRASCIKSVSGTWVEDDSRTLDSSRMAYGHFLLPNMFYHSGYASLKFTVSRRELSSQADASSTKDQDDLEDGFSELETPAAESEYGKDEFNDIKDGEEPREELEFSDTEVEPSEKKGRRRAQSEIFKLIDNSPTTSVQVLMDKWVEEGKELSRQDISLAMVNLRRRKLYFKAFQLSEWVVSKSQLEVTEKDHATRVDLIAKLRGLHEAEMYIERIPESFKGETVYQTLLASCVAQNNLKKAEETFNKMKDLKFPLTSYVWNQLLLLYKRHDKKKIADVLLMMENENVKPSPFTYKILIDAKGQSKDIDGMDLIVEKMKAQGIEPDIRTKAVLVGHYKTAGLEKKAEDMLKEMEGENLKENSWLGRYLLPLYANLGKADEVGRIWEVCQASPRIEDCLAAIEAFGKLKKIDEAEAVFEMISKRWKLSSKNYSVMLKVYANNKMLAKGKDLIKRMAESGCQIGPLTLDDLVKLHIQAGEVEKADTILQKAIMQNQLKPLIISYIAIMEQYAKRGDVHNSEKILHKMKQAGYTIRLRQYQILLQAYINAKLPAYRIRDSMKADNVLPNRDFANLLAQVDGFRKNPASDLLD* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0821 605 Pfam Pentatricopeptide repeat domain 508 560 IPR002885 -
Ahy6g0821 605 Pfam PPR repeat 417 438 IPR002885 -
Ahy6g0821 605 Pfam PPR repeat 447 475 IPR002885 -
Ahy6g0821 605 Gene3D Tetratricopeptide repeat domain 508 598 IPR011990 GO:0005515
Ahy6g0821 605 Gene3D Tetratricopeptide repeat domain 238 408 IPR011990 GO:0005515
Ahy6g0821 605 Gene3D Tetratricopeptide repeat domain 409 507 IPR011990 GO:0005515
Ahy6g0821 605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 307 341 IPR002885 -
Ahy6g0821 605 TIGRFAM PPR: pentatricopeptide repeat domain 447 476 IPR002885 -
Ahy6g0821 605 TIGRFAM PPR: pentatricopeptide repeat domain 241 272 IPR002885 -
Ahy6g0821 605 TIGRFAM PPR: pentatricopeptide repeat domain 309 343 IPR002885 -
Ahy6g0821 605 MobiDBLite consensus disorder prediction 94 135 - -
Ahy6g0821 605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 443 477 IPR002885 -
Ahy6g0821 605 MobiDBLite consensus disorder prediction 98 118 - -
Ahy6g0821 605 PANTHER OS12G0527900 PROTEIN 33 605 - -
Ahy6g0821 605 Pfam Pentacotripeptide-repeat region of PRORP 238 400 IPR033443 -
Ahy6g0821 605 PANTHER OS01G0280400 PROTEIN 33 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0821 Ahy-Chr6 10268420 10271745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0821 150 545 EF-hand Containing Proteins AT1G02150 24.634 8.65e-37 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0821 - - mtr:MTR_7g089770 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0512 16 9420558 9423919 Ahy6g0821 6 10268420 10271745 hybridization