Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0588 ATGGCCGCGATCACGAGAACGCACTTGTTTGGCGCTCCGAGTTTTCATCTGAGAGAAGCTCAATTGCGTTTTGCAGGTTACAGTGCTATGCCTACGCGCTCCCGAGAGTCTCATCGGAACGTGGTTCTCACGCGCAGGGCTGGAAATGCCGCCGGGATTCTTCCCATAATCAGGGCTCAGACTCCCTCAGTGCCTCAGTATGTTCCAGATTCCGATTTCTACAAAGTGGAAGCCATTCTTAGGCCATGGCGGATCCCTAAGGTTTCTTCGGCATTGTTGAAAATGGGAATTCGTGGAGTCACTGTGTCTGATGCTAGGGGCTTTGGTGCTCAGGGTGGTTCAAAAGAGAGGCAAGGAGGCTCTGAATTTTCTGAAGACAGTTTTATTCCCAAAGTTAAGATGGAAATAGTGGTGAGGAAGGATCAGGTCGAGGATGTAATAGCCAAAATTATTGAAGAGGCAAGGACAGGAGAGATTGGTGATGGAAAAATATTCTTAATTCCTGTCTCAGATGTTATAAGAGTTCGTACAGGTGAGCGTGGAGAACATGCAGAGAGGATGGCAGGGGGCCGAAGTGACATGTCTTCTGGCATATAA 597 0.4841 MAAITRTHLFGAPSFHLREAQLRFAGYSAMPTRSRESHRNVVLTRRAGNAAGILPIIRAQTPSVPQYVPDSDFYKVEAILRPWRIPKVSSALLKMGIRGVTVSDARGFGAQGGSKERQGGSEFSEDSFIPKVKMEIVVRKDQVEDVIAKIIEEARTGEIGDGKIFLIPVSDVIRVRTGERGEHAERMAGGRSDMSSGI* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0588 198 PANTHER NITROGEN REGULATORY PROTEIN P-II HOMOLOG 42 195 - -
Ahy6g0588 198 PANTHER NITROGEN REGULATORY PROTEIN P-II 42 195 IPR002187 GO:0006808|GO:0030234
Ahy6g0588 198 PRINTS P-II protein signature 156 176 IPR002187 GO:0006808|GO:0030234
Ahy6g0588 198 PRINTS P-II protein signature 125 148 IPR002187 GO:0006808|GO:0030234
Ahy6g0588 198 PRINTS P-II protein signature 74 89 IPR002187 GO:0006808|GO:0030234
Ahy6g0588 198 PRINTS P-II protein signature 95 113 IPR002187 GO:0006808|GO:0030234
Ahy6g0588 198 SMART P_II_3 76 178 IPR002187 GO:0006808|GO:0030234
Ahy6g0588 198 ProSitePatterns P-II protein C-terminal region signature. 156 169 IPR017918 GO:0006808|GO:0030234
Ahy6g0588 198 Pfam Nitrogen regulatory protein P-II 74 181 IPR002187 GO:0006808|GO:0030234
Ahy6g0588 198 Gene3D - 63 195 IPR015867 -
Ahy6g0588 198 SUPERFAMILY GlnB-like 74 184 IPR011322 -
Ahy6g0588 198 ProSiteProfiles P-II protein family profile. 73 185 IPR002187 GO:0006808|GO:0030234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0588 Ahy-Chr6 7225774 7229031 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0588 - - gmx:100499915 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0750 16 13627155 13630417 Ahy6g0588 6 7225774 7229031 hybridization