Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0528 ATGAGCACTATGAAGTGCAGGAGAGGTACCAATGGATGTCTCAAAAACATGGTTTTGACAACTTTTATGGTGGCCGTGGTTGTTGTCCAACTCCAACATGTGAGTTGCAATGGTGTTGGTGTTGGTGGCAATGGATTTGTTCAACGAAGTGGCACCAACTTTGTTGTGAATGGGAAACGTTTCTACTTCAATGGATTCAATGCTTACTGGCTCATGTACATGGGAACTGACCCATCTACAAGGTCCAAGGTCACAACCACTTTACAACAAGCCTCCATCCATGGCTTAAGGGTTGCAAGAACTTGGGCCTTCAATGATGGACCTAATTACAGAGCCCTCCAGATTTCTCCCGGCACCTATGACGAGAATGTGTTTAGAGGATTGGATTTTGTAGTTTCAGAAGCGCGAAAATATGGGGTGCGGTTGATTCTGAGCTTTGTGAACAATTGGAAAGATTTTGGTGGGAAAAATCAGTATGTGCAATGGGCAAGAGAGCATGGTGGCCAAAATGTTAACAATGAAGATGACTTCTTTAGTAACCCAGTTGCTAAGCAATACTACAAGAACCATATTAAGGCTGTGGTAGGAAGAAGAAACACGATAACAGGGGTGGCATATAAGGATGATCCAACCATTTTTGCGTGGGAATTGATGAACGAACCTCGTTCCCAAAGTGACTACTCAGGCAAAGTTATCAAGGAATGGGTGATTGAGATGGCTGCTTATGTGAAATCCATTGATACAAATCATTTACTTGAAGTTGGACTTGAAGGCTTCTATGATGAAACCAGAAAACAATTCAATCCAGGATTTCAATTAGTTGGCACTGATTTCATTTCTAGCAACCAAGTTCCCCAAGTCGATTTTGCTACTATCCATCTCTATCCGGATGAATGGATGGCAGGGGCGAACGAAGTAGCAAAGGGTGAATTTGTAGACAAATGGATAAAAGCACACATTGAAGACACACAGAAGATTTTGGGAAAGCCCATTGTTGTTGGAGAGTTTGGCAAGTCTTCAAAGACACCAGGGTATAGCGTTGCAGAAAGGGACAGCTACATGAGAAAGATCTATGATGCAATATTCACTAGTGCTAGTAGTGGCGGACCTTGTGCTGGTGGGCTTTTTTGGCAGCTCATGGCCCAACAAATGGATGGCTTCCGAGATGGCAATGAAATTATCTTCCAAGAGTCCCCTTCTACCACCAAAATTATCGACCAACAATCTTACAGAATGTCATCTATCTCTTAG 1251 0.4285 MSTMKCRRGTNGCLKNMVLTTFMVAVVVVQLQHVSCNGVGVGGNGFVQRSGTNFVVNGKRFYFNGFNAYWLMYMGTDPSTRSKVTTTLQQASIHGLRVARTWAFNDGPNYRALQISPGTYDENVFRGLDFVVSEARKYGVRLILSFVNNWKDFGGKNQYVQWAREHGGQNVNNEDDFFSNPVAKQYYKNHIKAVVGRRNTITGVAYKDDPTIFAWELMNEPRSQSDYSGKVIKEWVIEMAAYVKSIDTNHLLEVGLEGFYDETRKQFNPGFQLVGTDFISSNQVPQVDFATIHLYPDEWMAGANEVAKGEFVDKWIKAHIEDTQKILGKPIVVGEFGKSSKTPGYSVAERDSYMRKIYDAIFTSASSGGPCAGGLFWQLMAQQMDGFRDGNEIIFQESPSTTKIIDQQSYRMSSIS* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0528 416 Gene3D Glycosidases 43 416 - -
Ahy6g0528 416 PANTHER - 21 415 IPR045053 GO:0004553
Ahy6g0528 416 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 1 21 415 - -
Ahy6g0528 416 SUPERFAMILY (Trans)glycosidases 46 405 IPR017853 -
Ahy6g0528 416 Pfam Cellulase (glycosyl hydrolase family 5) 57 348 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0528 Ahy-Chr6 6448398 6452999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0528 18 415 Glycoside Hydrolase AT5G66460 53.367 7.19e-154 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0528 K19355 - gmx:100787923 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0818 16 14755339 14760606 Ahy6g0528 6 6448398 6452999 hybridization