Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0489 ATGGGTTCCGGTTGCGTCGGTCACTGCCTTCCATTCTCATTCTCATTCTCATTCTCATTCTCATTTCCATTATCATTCTTGTTAGTGCTGTGGTTCTATTCAATTTCTTCAGCTTATGGATGCGATAAAGCTCCAGCTATATTCGTGTTTGGCGATTCCAACTCGGACACGGGTGGACTCGCCTCTGGACTCGGTTACCCTATCAACCTCCCCAATGGACGCAGCTTCTTCCATAGATCCACCGGTCGCTTGTCCGATGGACGCCTCATAATCGATTTGCTCTGCCAAAGTATCAACATGAGTTTATTGAACCCATATATGGACCCATTGTCTGGATCAACGTTCACAAATGGAGCAAACTTTGCAGTTGTAGGGTCCTCTACACTCCCCAAGTATCTTCCATTCTCTTTAAATATACAAGTCATGCAGTTCAGGCGTCTCAAAGCTCGTGCACTTGAACTTGTTAATGCAGGTGCAACCAATTTGATAAATGATGGAGGGTTCCGAGATGCACTCTACTTGATTGATATTGGGCAAAATGACATTGCTGATTCATTTACCAAAAATTTGTCATATGCGCAAGTGATCAAGAGGATCCCAACAGTTGTTGCCGAGATTGAAACGGCTGTTAGGAGTTTGTATAATGAAGGTGCCAGGAAGTTTTGGCTTCACAACACTGGACCCTTAGGATGTCTTCCCAAATTAATTGCACTGGCTCAAAAGAAGGATCTGGATTCATCTGGATGTCTTTCTAGCTATAACTCTGCTGCAAGATTATTTAATGATGCACTGAATCGGTTGTCACTTAAGCTAAGAACTCAATTGAAGGATGCTACCATAGTCTATGTCAATATTTATGCCATTAAGTATGATCTTATCACAAATGCCGCCAAATATGGTTTCTCGAATTCGCTGATGGTGTGCTGCGGGTCTGGAGGGCCTCCTTACAATTTTGACCCAAGGGTGACATGTGGGCAACCAGGGTATCAGGTTTGTAGTGAAGGATCAAAATATGTTAGCTGGGATGGAATCCATCTTACTGAGGCTGCAAATACATTCATAGCTTCAAAAATTCTTTCCAAGGCCTATTCCACACCACCTACAGCTTTTGATTTCTTCTGTAATCACTGA 1131 0.4297 MGSGCVGHCLPFSFSFSFSFSFPLSFLLVLWFYSISSAYGCDKAPAIFVFGDSNSDTGGLASGLGYPINLPNGRSFFHRSTGRLSDGRLIIDLLCQSINMSLLNPYMDPLSGSTFTNGANFAVVGSSTLPKYLPFSLNIQVMQFRRLKARALELVNAGATNLINDGGFRDALYLIDIGQNDIADSFTKNLSYAQVIKRIPTVVAEIETAVRSLYNEGARKFWLHNTGPLGCLPKLIALAQKKDLDSSGCLSSYNSAARLFNDALNRLSLKLRTQLKDATIVYVNIYAIKYDLITNAAKYGFSNSLMVCCGSGGPPYNFDPRVTCGQPGYQVCSEGSKYVSWDGIHLTEAANTFIASKILSKAYSTPPTAFDFFCNH* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0489 376 Pfam GDSL-like Lipase/Acylhydrolase 47 358 IPR001087 GO:0016788
Ahy6g0489 376 SUPERFAMILY SGNH hydrolase 46 360 - -
Ahy6g0489 376 CDD SGNH_plant_lipase_like 45 361 IPR035669 -
Ahy6g0489 376 Gene3D SGNH hydrolase 40 364 IPR036514 -
Ahy6g0489 376 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 25 375 - -
Ahy6g0489 376 PANTHER OS01G0329900 PROTEIN 25 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0489 Ahy-Chr6 5979284 5983614 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0489 44 358 Acyl Lipid Metabolism Gene Families AT4G10950 26.269 2.35e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0489 - - gmx:100797617 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0868 16 15555397 15559121 Ahy6g0489 6 5979284 5983614 hybridization