Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0174 ATGGAAAGCAGCCAAGGGGAAAAAGAAAGCGCTTCTGCAGAAGCAGCTGTGTTTGAGGACTTGCTGCCGGTGATGGCAGAGAAGCTTGACGTGGAGACTTTTGTGTCTGAGCTGTGTGGGGGTTTCAAGCTTCTGGCTGACCCCGAAAAGGGTTTGATCACGGCGGAGAGTCTGAGGAGGAACTCGGAGCTTCTGGGCATGGATGGGATGAGCAAAGAGGATGCAGAGGCTATGGTTAGACATGGTGATCTTGATGGGGATGGGAAGCTGAATGAAACTGAGTTTTGCATCCTGATGGTGAGGCTTAGCCCCGAAATGATGCAAGATGCTGAGGCATGGCTTCACAAAGCAATTCAACAAGAGCTCACCAAATCATCAACCTTGTAA 387 0.5039 MESSQGEKESASAEAAVFEDLLPVMAEKLDVETFVSELCGGFKLLADPEKGLITAESLRRNSELLGMDGMSKEDAEAMVRHGDLDGDGKLNETEFCILMVRLSPEMMQDAEAWLHKAIQQELTKSSTL* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0174 128 PANTHER CALCIUM-BINDING PROTEIN KIC 8 124 IPR044205 GO:0005509
Ahy6g0174 128 Pfam EF-hand domain pair 49 101 IPR002048 GO:0005509
Ahy6g0174 128 ProSitePatterns EF-hand calcium-binding domain. 83 95 IPR018247 -
Ahy6g0174 128 ProSiteProfiles EF-hand calcium-binding domain profile. 70 105 IPR002048 GO:0005509
Ahy6g0174 128 SUPERFAMILY EF-hand 18 114 IPR011992 -
Ahy6g0174 128 PANTHER CALCIUM-BINDING PROTEIN KIC 8 124 - -
Ahy6g0174 128 Gene3D - 16 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0174 Ahy-Chr6 2132864 2133750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0174 7 122 EF-hand Containing Proteins AT2G46600 72.414 8.36e-59 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0174 K24345 - gmx:100787197 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1250 16 23195608 23196456 Ahy6g0174 6 2132864 2133750 hybridization
Ahy6g0174 6 2132864 2133750 Ahy12g0364 12 5279698 5280420 PCT
Ahy12g0364 12 5279698 5280420 Ahy6g0174 6 2132864 2133750 PCT