Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0169 ATGAACCAGGAAATGAATGGGATTGAGGGTGAGAGAGCAAGGGAGAATAATGATAACAATAATGTGAATGTGCCGGAGAGAATAGATTATGTGTTCAAGGTGGTTGTGATTGGAGACTCGGCAGTGGGGAAGACTCAAATACTGTCTAGGTTTGCAAAGAATGAGTTCTGCTTTGACTCAAAGTCCACCATCGGAGTTGAGTTCCAGACCAGGACTGTCACCATTGGTGGCAAACTCATCAAAGCACAGATCTGGGACACTGCTGGCCAAGAAAGGTACAGGGCAGTGACAAGTGCGTACTACAGAGGAGCATTAGGAGCAATGGTGGTGTACGACATAACAAAGAGGCAGACATTTGATCACGTGGCGAGGTGGATAGAGGAGCTGAGGGCGCATGCAGACACTTCCATAGTCATAATGTTAATTGGGAACAAGGGTGACCTTGTGGAGAAGAGAGCAGTGCGGACGGAGTATGCGGTGGAGTTTGCGGAGGAACAGGGGCTCTTCTTCTCGGAGACTTCAGCTCTCAGCGGTGAGAATGTGGAGAGTGCCTTCTTCAAGTTGCTTCAACACATCCATTTCGTGGTCTCTAAGAAGTCATTGCAATCTGCCAACAATGTCATTAATAATGCTGTCACTCTTAAGGGATCAAAGATTGATGTAATCTCTGGTAATGACTTAGAGTCAGAGATTACTGAGATTAAGAAAGTCTCTTCATGCTCTTGTTGA 729 0.4609 MNQEMNGIEGERARENNDNNNVNVPERIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTIGGKLIKAQIWDTAGQERYRAVTSAYYRGALGAMVVYDITKRQTFDHVARWIEELRAHADTSIVIMLIGNKGDLVEKRAVRTEYAVEFAEEQGLFFSETSALSGENVESAFFKLLQHIHFVVSKKSLQSANNVINNAVTLKGSKIDVISGNDLESEITEIKKVSSCSC* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0169 242 Pfam Ras family 33 192 IPR001806 GO:0003924|GO:0005525
Ahy6g0169 242 MobiDBLite consensus disorder prediction 1 20 - -
Ahy6g0169 242 SMART rab_sub_5 32 195 - -
Ahy6g0169 242 SMART ran_sub_2 37 234 - -
Ahy6g0169 242 SMART rho_sub_3 34 198 IPR001806 GO:0003924|GO:0005525
Ahy6g0169 242 CDD Rab11_like 29 193 - -
Ahy6g0169 242 TIGRFAM small_GTP: small GTP-binding protein domain 31 185 IPR005225 GO:0005525
Ahy6g0169 242 ProSiteProfiles small GTPase Ras family profile. 26 242 IPR001806 GO:0003924|GO:0005525
Ahy6g0169 242 PRINTS Transforming protein P21 ras signature 170 192 - -
Ahy6g0169 242 PRINTS Transforming protein P21 ras signature 32 53 - -
Ahy6g0169 242 PRINTS Transforming protein P21 ras signature 135 148 - -
Ahy6g0169 242 PRINTS Transforming protein P21 ras signature 55 71 - -
Ahy6g0169 242 PRINTS Transforming protein P21 ras signature 73 95 - -
Ahy6g0169 242 ProSiteProfiles small GTPase Rab1 family profile. 27 240 - -
Ahy6g0169 242 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 210 IPR027417 -
Ahy6g0169 242 PANTHER RAS-RELATED PROTEIN RABA3 1 242 - -
Ahy6g0169 242 Gene3D - 25 222 IPR027417 -
Ahy6g0169 242 PANTHER - 1 242 - -
Ahy6g0169 242 SMART ras_sub_4 29 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0169 Ahy-Chr6 2097772 2099334 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0169 K07904 - gmx:100787725 368.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1255 16 23269520 23271071 Ahy6g0169 6 2097772 2099334 hybridization
Ahy6g0169 6 2097772 2099334 Ahy12g0368 12 5306463 5308184 PCT
Ahy6g0169 6 2097772 2099334 Ahy2g0344 2 4325128 4327460 PCT
Ahy12g0368 12 5306463 5308184 Ahy6g0169 6 2097772 2099334 PCT
Ahy2g0344 2 4325128 4327460 Ahy6g0169 6 2097772 2099334 PCT