Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3188 ATGATGATCATCGAGCCATCGATCGCTGTCCGATTTACCTACGCTTCCGCCACTCGCTCCGCCGCCGCCGCCGCCGATAAAAGATCACTGTGGAGTGCCGATGATGTAAATGCAGCAGGTTCCGTTGCTTCGTACCAGCTTGCATGTACGTGCGGTTTCGAAGCTCCGTGGATAAGACGTCAAAAATACACTGGCACTCCATTCATAAAAAGAAACAAATATGTAAAGAATAGAATTCGAGTATCATCAGAGAATCTGGGCTCACCTCAGGATCCTGTCAAGAAAGATGAAAAGTCATCCTATCATCCATTTGAAGAAATTGCCATGTCAACATCTGAGAATACTGAAGATGCTAGGCTTACAGCAGCAGAAACAAGTAGAACAATTATTGAGGTTAACAGCAAAGCAACACTGATGTTCACAAGTGTGATTAACGATGTGGTTCATGAAAATGTTGTTTGGCCAGATATGCCTTATTTGACTGATGATCGAGGAAATATATACTTCCAGGTGAAGAACAGTGATGATGTTTTGCAATCTCTAACTTCAGAGAATAATTTTGTGCAAGTTATTGTTGGTGTGGATGCCATGGAAATGTTGTCTGAGATGGACTTATCAGGTCCCTCAGAAATTGGTTTTGGGATTGAAGAAATTGATGATCAAGATACTGATGATACAGATGACAGTGATGAAGAGGATGAAGATGAGGATGAGAATGAAGAATATGATTCGGAATGGGTGACTGTTGTTTCCGACAACGATGAGCAAGAAGATGCAGATGAAACACTTGAAGACTGGGCAAAGTTGGAGACTATGCGCTCTTCTCATCCAATGTATTTTGCCAAAAAATTGGCCGAGAGTGCTTCTGATGATCCAATTGATTGGATGGAGCAGCCTCCAGCTTGTGTAGCTATCCAAGGGGTTATAAGACCTGCTTTTATTGAAGAACATTCTACAATACAAAAGCATCTATCTACCAATCAATCAGATAATTCTGACATAACTGAATCTGTAAAGGGGGAAATCGGTGTTATTAATGGTCATGTGCATAACTCAATGTCATCTAAAGATAATACGGCAGAACAGGTGGAGAATAATGAGAATAGTGATTTGCCTTTCAATGAGACTTCATTTTACAAATTGGAGATGATTAAGATTCAAGTGATTTCAGCACATGGACATCCTACTGACGTTGAAATAGAAGACTACGGCAGAGCTCAACCTGATGCTCTTGCACACTCAGCCTCCAAAATCATAGCTCGTTTGAAAGCTGATGGGGAAAAGACCTTACAGGCCTTTAAGTCTGTGTGTTGGAGATACAAGAGTATCCAAGTAGAGGAGGCACAACTTATTTCTGTAGACTCCCTTGGGTTTGATCTAAGAGTTTGTTCAGGAACTCAAGTTCAAACCCTGAGATTTACATTCAAAAAGAGGGCCACTTCAGAGTACAGTGCAGAGAGACAACTCAATGAATTATTATTTCCTATAAATCACCCAAAAGCTGCAAAAAACGAAGCACCCCCCTCCAAATAA 1533 0.4103 MMIIEPSIAVRFTYASATRSAAAAADKRSLWSADDVNAAGSVASYQLACTCGFEAPWIRRQKYTGTPFIKRNKYVKNRIRVSSENLGSPQDPVKKDEKSSYHPFEEIAMSTSENTEDARLTAAETSRTIIEVNSKATLMFTSVINDVVHENVVWPDMPYLTDDRGNIYFQVKNSDDVLQSLTSENNFVQVIVGVDAMEMLSEMDLSGPSEIGFGIEEIDDQDTDDTDDSDEEDEDEDENEEYDSEWVTVVSDNDEQEDADETLEDWAKLETMRSSHPMYFAKKLAESASDDPIDWMEQPPACVAIQGVIRPAFIEEHSTIQKHLSTNQSDNSDITESVKGEIGVINGHVHNSMSSKDNTAEQVENNENSDLPFNETSFYKLEMIKIQVISAHGHPTDVEIEDYGRAQPDALAHSASKIIARLKADGEKTLQAFKSVCWRYKSIQVEEAQLISVDSLGFDLRVCSGTQVQTLRFTFKKRATSEYSAERQLNELLFPINHPKAAKNEAPPSK* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3188 510 MobiDBLite consensus disorder prediction 209 259 - -
Ahy5g3188 510 PANTHER CREG1 PROTEIN 1 504 - -
Ahy5g3188 510 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 1 504 - -
Ahy5g3188 510 SUPERFAMILY FMN-binding split barrel 371 493 - -
Ahy5g3188 510 MobiDBLite consensus disorder prediction 215 259 - -
Ahy5g3188 510 Gene3D - 407 505 IPR037119 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3188 Ahy-Chr5 113744795 113749341 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3188 - - aprc:113867269 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3602 15 158742056 158746505 Ahy5g3188 5 113744795 113749341 hybridization