Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3179 ATGAAGAAAGTTGTGTTGAAGTTGGATTTACACGATGACAAAACCAAGCAAAAAGCTATGAAAACTGTCTCTGGCATTTCAGGGGTTGAATCAGTATCTGTGGACATGAAGGACAAGAAAATGAGTTTAATTGGTGAAATTGATCCGGTACATGTAGTAGGGAAATTACGAAAATGGTGTCACACAGAAATATTATCAGTTGGGCCAGCAAAAGAAGAGAAGAAGAAGGAAGAAGCTAAGAAGCCAGAAGAGAATAAGAAACAAGAAGCTGCAAAAATATATGAAGCTTATCCACTTTATTACCAAATGAGACCAGCAACTACACAATATCATCATTATCAACCATACCAATATGCTACAAGTTGTGGAGAAGAAGAATATAATAATGGCTGTGTGATCTGCTAG 405 0.3654 MKKVVLKLDLHDDKTKQKAMKTVSGISGVESVSVDMKDKKMSLIGEIDPVHVVGKLRKWCHTEILSVGPAKEEKKKEEAKKPEENKKQEAAKIYEAYPLYYQMRPATTQYHHYQPYQYATSCGEEEYNNGCVIC* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3179 134 SUPERFAMILY HMA, heavy metal-associated domain 1 60 IPR036163 GO:0046872
Ahy5g3179 134 Pfam Heavy-metal-associated domain 9 57 IPR006121 GO:0046872
Ahy5g3179 134 Gene3D - 1 73 - -
Ahy5g3179 134 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 134 - -
Ahy5g3179 134 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 1 134 - -
Ahy5g3179 134 MobiDBLite consensus disorder prediction 68 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3179 Ahy-Chr5 113680641 113681714 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3179 - - gmx:100801079 140.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3594 15 158692601 158693945 Ahy5g3179 5 113680641 113681714 hybridization
Ahy5g3179 5 113680641 113681714 Ahy19g3584 19 158476023 158476836 PCT
Ahy19g3584 19 158476023 158476836 Ahy5g3179 5 113680641 113681714 PCT