Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3160 ATGGAGGCACCATTACTAATGAGAGAGTCAAGTCCTCCAACAGAATCTGATGATTACCTGGAAGTGAAGAACTTGAAGGATGCAAAATTTGTGTTGTGCAGTGAGACAGTGAAGTTATGGAAGATTGCAGGGCCAGTGGCACTCTCCTCACTCTTTCAGTTTCTCACAGTTTCTTCACTCAACATCTATGCTGGTCACCTTGGAGACATTGTTCTATCTTCCATCTCTCTTTACCTTGGTGTCATATCCTCCTTTTATTATAATTTCTTGTTTGGCATGTCATCAGCACTGCTAACACTATGTGGACAAGCTTATGGAGCAGGACAAGTTAAATCCACTGGAATCTATCTCCAAAGATCATGGATTGTGCTAACTATGAGCTGCATAATCCTCTTACCAACTCACATTTATGCAACTCCAATCTTAGAGTTCCTTGGCCAAGACAAAGAAATATCAGAGCTTGCTGGAAACTATGCATTGAAAGCAATTCCATCCATGTTCTCCTTTGCTTTCATACTCCCCACACAAAGATTCCTTCAAGCTCAAAGCAAGGTTATGGTGATAACATGCATAACATTTGTGGCCCTACTTGTACAAAATTTGCTTCTTTATGTCTTCATCTATGGATTTGATTGGGGCTCAACAGGGTTGGCTATGGCTCATAGTGTCTCACATTGGGTTCTTGCTTTGGCTCTTGTTGTGTATGCTTCTTGTTGGTGTAAGGAAGGTTGGAGTGGTTATTCTTTCTTGGCTTTCAAAGATTTGTTGCCATTTACTTGGCTAAGTCTTTCTTTATCTGTTATGACATGGTTGGAGCAATGGTATTCTACTTTCATTGTCCTTCTTGCTGGTCACTTAGACAACCCTGTTATTGCTCTTGCTTCCTATTCTATTTGCACCAATATTCAGGGTTGGTACTTGATGCTGCTACTTGGAATAAGCACTGCCATAAGTGTTCGAGTGTCCAATACGCTTGGCATGTCACATCCAAGAGCAGCAAGATACTCATTCATTGTGACAATGTGTGAATCTCTCATCATTGGAATTTCATTCATGAGTGTTGTTTTGTTGTGTAAACAAAACCTTGCCATGATCTTCACCAACAGTGAGGATTTGATCAGAGCAGTGGCTGATTTAGCTTACCTTCTTGCTCTAACCATGCTTCTTAGTAGTGTTTCACAAGTCATATCAGGTGTTGCAATTGGAAGTGGATGGCAGGTGATGATTGGATACATAAACTTGGCATGTTATTATATTGTTGGACTCTCTCTTGGCTATTTTCTTGGTTTCAATTACCATGTGGGACTTAAGGGTCTGTGGGGTGGCACACAGTGCGGTAGTGTCATTCAAATATTTGTCCTTATACTAATTATTTGGAAGACCAACTGGACCAAGGAGGTGGAACAAACAGCTAACCGAATGAGAATATGGGGCTCTAGCAACCACCACAAGGAGATGATATAA 1464 0.4092 MEAPLLMRESSPPTESDDYLEVKNLKDAKFVLCSETVKLWKIAGPVALSSLFQFLTVSSLNIYAGHLGDIVLSSISLYLGVISSFYYNFLFGMSSALLTLCGQAYGAGQVKSTGIYLQRSWIVLTMSCIILLPTHIYATPILEFLGQDKEISELAGNYALKAIPSMFSFAFILPTQRFLQAQSKVMVITCITFVALLVQNLLLYVFIYGFDWGSTGLAMAHSVSHWVLALALVVYASCWCKEGWSGYSFLAFKDLLPFTWLSLSLSVMTWLEQWYSTFIVLLAGHLDNPVIALASYSICTNIQGWYLMLLLGISTAISVRVSNTLGMSHPRAARYSFIVTMCESLIIGISFMSVVLLCKQNLAMIFTNSEDLIRAVADLAYLLALTMLLSSVSQVISGVAIGSGWQVMIGYINLACYYIVGLSLGYFLGFNYHVGLKGLWGGTQCGSVIQIFVLILIIWKTNWTKEVEQTANRMRIWGSSNHHKEMI* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3160 487 CDD MATE_eukaryotic 35 469 IPR045069 GO:0042910|GO:1990961
Ahy5g3160 487 TIGRFAM matE: MATE efflux family protein 45 440 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy5g3160 487 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 478 - -
Ahy5g3160 487 PANTHER PROTEIN DETOXIFICATION 1 478 - -
Ahy5g3160 487 Pfam MatE 45 203 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy5g3160 487 Pfam MatE 267 426 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3160 Ahy-Chr5 113432989 113437344 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3160 K03327 - gmx:100789611 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3572 15 158462982 158468431 Ahy5g3160 5 113432989 113437344 hybridization