Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy5g3153 | ATGGGTTCTCGCTACGAAATCGAAGTGAAGCTGGAATCAGCCCGCGGGCTCAAGAACGTGAACTGGCGCTACGGGCCCAACAGGCCCTACGCCGTGGTATGGGTCGACCCAAGCAACAAGACGTCGACACGTGTCGACGAAGAAGGAGACACCGATCCCAACTGGGACGAAACCCTCGTCATTCCGCTTCCACCAGAGCCACTGGAGAACCTCACGCTTCACGTGGACGTCGTCCACGCTGGCAGAGAAGAAGACACAAAGCCACTAATCGGCTCGGCTCGGCTCAAATTAGCCGAGGTTCTAGACGACGTTGGAGTCGGCGTTCCATTAAGCAGAACTCTCAAACTGAAACGACCCTCCGGAAGGCCACACGGAAAGGTTAACGTTAACGTTACTGTTAGAGAGCCACGCTATCGTGCGCCGGATCCATACAATGCTCCACCTTACGGCGTTCCACCGCCAGGGTCCAGGGATTACTCTCCTGCGCCAGGATCGGGATACGGTTACCCTTACGGTGGTGCTCCGCCGGTGCAGGGGTCGTATTATTCGAATCCACCGGCGGGGTATCCGTACGGCGGGGGATACGGTGGAGCTCCTCCTCAGCCGGCGGCGTATGGTGAGGGAGCGTACGGTAGTTACGGCGGGTATGGATCGGGGGCTCCGTCATCGGCGCCGGTTGTAGTGGAGGAGAAGAAGAAGAGTAAGTTTGGTGGGATGGGGACGGGTTTGGCGGTTGGAGCGTTAGCTGGTGCGGTTGGTGGAATAGCGCTTGTGGAAGGTGCTGATTATTTGGAGGATAAGATTGCTGATGATGCTGCTGAGAAGGTTGAGGATGATCTTGGCTACGATGATGGTGGTTACGACGGTGATGATTTCTAG | 879 | 0.57 | MGSRYEIEVKLESARGLKNVNWRYGPNRPYAVVWVDPSNKTSTRVDEEGDTDPNWDETLVIPLPPEPLENLTLHVDVVHAGREEDTKPLIGSARLKLAEVLDDVGVGVPLSRTLKLKRPSGRPHGKVNVNVTVREPRYRAPDPYNAPPYGVPPPGSRDYSPAPGSGYGYPYGGAPPVQGSYYSNPPAGYPYGGGYGGAPPQPAAYGEGAYGSYGGYGSGAPSSAPVVVEEKKKSKFGGMGTGLAVGALAGAVGGIALVEGADYLEDKIADDAAEKVEDDLGYDDGGYDGDDF* | 293 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy5g3153 | 292 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 4 | 134 | IPR035892 | - | |
| Ahy5g3153 | 292 | PANTHER | PROTEIN SRC2-LIKE | 1 | 292 | - | - | |
| Ahy5g3153 | 292 | ProSiteProfiles | C2 domain profile. | 1 | 110 | IPR000008 | - | |
| Ahy5g3153 | 292 | MobiDBLite | consensus disorder prediction | 141 | 159 | - | - | |
| Ahy5g3153 | 292 | CDD | C2_SRC2_like | 6 | 129 | IPR044750 | GO:0006952 | |
| Ahy5g3153 | 292 | Pfam | C2 domain | 7 | 101 | IPR000008 | - | |
| Ahy5g3153 | 292 | SMART | C2_3c | 6 | 109 | IPR000008 | - | |
| Ahy5g3153 | 292 | Gene3D | C2 domain | 2 | 135 | IPR035892 | - | |
| Ahy5g3153 | 292 | MobiDBLite | consensus disorder prediction | 138 | 162 | - | - | |
| Ahy5g3153 | 292 | PANTHER | INGRESSION PROTEIN FIC1 | 1 | 292 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy5g3153 | Ahy-Chr5 | 113353164 | 113354337 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ahy5g3153 | - | - | ahf:112751830 | 392.119 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Ahy15g3564 | 15 | 158416955 | 158418113 | Ahy5g3153 | 5 | 113353164 | 113354337 | hybridization |