Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3117 ATGAGAGATACCAACATCCTTGTGGTTGGTCAAGACGGGATTTTGCGGCCGTTGATGAAGACCGCGACGAGATCCACGACGGTTCTAGTGTTCTCTATGCTCTTCATATTCGGCGCGTTGGTATACACGCTCCTTCTCCCCTCGCATCAGTTAATTTTTGGAGGCACACCTTCCAAATCAATACTAGCCACAACAGAAAACAACAATGTGCCCAAAATGCCCCCAAAGCAAATAGAGATTCCACTAAACTGCACTGCATACAATCTAAACAAAATATGCCCCAACCATGAAGAAATCCCAGCCGACAATCAAGACCGTTTACCAAGCTCCACGTGTCCAGATTACTTCCGTTGGATCCACGAGGATCTAAGACCATGGGCCCACACCGGCATAACAAAGGAGATGGTAGACAAGGCTAGAAAAACAGCAAATTTCAAATTGGTGATTCTCAAAGGGAAGGCTTATTTGGAGACTTATGCAAAAGCGTTTCAGACAAGAGATGTTTTTACAAAGTGGGGGATATTGCAATTGTTAAGGAGGTATCCTGGGATGTTGCCTGATATGGAGTTCATGTTTGATTGTGTTGATTGGCCTGTCATTTTGGCTGAACGTTATGGTGGTTCTAATTCTAATAATGCTAGCAATGTTCCTCCACCACTCTTTAGATATTGTGCTAATGATGCTACATTGGACATTGTCTTCCCTGATTGGTCCTTTTGGGGTTGGGCTGAGATTAACATAAAGCCATGGGAGATTTTGTCAGGAGAGATGAAAGAAGGGAACAAGAGAACAACATGGCTTAAAAGAGAGCCATATGCTTACTGGAAAGGTAATCCTGATGTTGCTGACACAAGAAAAGACCTCATGAAATGCAATGTTACACATCAACAAGATTGGAATGCTCGTATTTATAAACAGGATTGGATAAAGGAATCAAAAGAAGGGTACAAGCAATCAGATTTGGCAAGCCAATGCATTCATAGATATAAGGTGTACATTGAAGGTTCTGCTTGGTCTGTTAGCCAAAAATACATTCTAGCATGTGATTCTGTCACACTGCTTGTAAATCCACACTACTATGATTTTTTCACAAGAGGGTTGGTTCCAATGCAACATTATTGGCCAATTAAGGAAGATGACAAATGCAGATCCATTAAATTTGCTGTGGAATGGGGCAATACTCATCAGAATGAGGCTAATAGTATTGGAAAGGCAGCAAGTGATTTCATCTATGATGAATTGAAGATGGATTATGTGTATGACTACATGTTTCATCTCTTGAATAGTTATGGTAAACTATTTAGATATACACCCACTTTAAGTTCTGAAGCTGTTGAGTTATGCGTGGAATCAATGGTTTGCAATGTTAAAGGAAGAGAAAGACAATTCATGATGGAATCAATGGTGAAGGGTCCTGCAATCACCAACCCTTGCACCATGCCCCCACCTTTTGACCCTCCATCTTTGCATGAAAACTTGAGGAGAAAAGAAAGTTTAATTCAACAAGTGGATTCATGGGAGAAGAGTTATTGGGGGAAACCAAAATAA 1548 0.4089 MRDTNILVVGQDGILRPLMKTATRSTTVLVFSMLFIFGALVYTLLLPSHQLIFGGTPSKSILATTENNNVPKMPPKQIEIPLNCTAYNLNKICPNHEEIPADNQDRLPSSTCPDYFRWIHEDLRPWAHTGITKEMVDKARKTANFKLVILKGKAYLETYAKAFQTRDVFTKWGILQLLRRYPGMLPDMEFMFDCVDWPVILAERYGGSNSNNASNVPPPLFRYCANDATLDIVFPDWSFWGWAEINIKPWEILSGEMKEGNKRTTWLKREPYAYWKGNPDVADTRKDLMKCNVTHQQDWNARIYKQDWIKESKEGYKQSDLASQCIHRYKVYIEGSAWSVSQKYILACDSVTLLVNPHYYDFFTRGLVPMQHYWPIKEDDKCRSIKFAVEWGNTHQNEANSIGKAASDFIYDELKMDYVYDYMFHLLNSYGKLFRYTPTLSSEAVELCVESMVCNVKGRERQFMMESMVKGPAITNPCTMPPPFDPPSLHENLRRKESLIQQVDSWEKSYWGKPK* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3117 515 Pfam Glycosyl transferase family 90 109 507 IPR006598 -
Ahy5g3117 515 PANTHER MOTIF-CONTAINING PROTEIN 1, PUTATIVE-RELATED 20 512 - -
Ahy5g3117 515 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 20 512 - -
Ahy5g3117 515 SMART cap10 184 437 IPR006598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3117 Ahy-Chr5 112834763 112841133 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3117 - - gmx:100800365 760.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3526 15 157983048 157989507 Ahy5g3117 5 112834763 112841133 hybridization