Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3060 ATGTCTGAAGTGAAAAACAAACTGGATTTATTGCAATGGCTTGGACCAGACATGTCAATAAAGGTTCTCACTCATTTGGATGACCCTTGTGACCTTGTCCGCGTTTCGACTCTTTCCCGTTCTTGGCACCAATTTGTTATTGAAAATGGCCTTTGCAAGCATCTTTGCTTGAAAATGTTTCCTGAACTATCTGGTGTTGGACATGTCATTGAGGTAGAGAACATGATTGAACCAGTGAGTAACATGCTTGGAAGTTCTTCGAATTGGGAATGTCTTAAGAGAAATCATAAAGTCTATGCGTTCCTAGCATGTGGTCTCACTCCTTCTATCAGCAAAAATTGCATCTCGGATGCCATAAGTGCATCCAGCACCGATAACTACCCTGAAGAAAGTGTTCTGAATACGTTGGACCCTCGAGATAGAACTGATTTTAGAGCATCGTACTGGTCTAGTAAAGGGGAAAGTGATCCTTCTGTACCAGAGACTTTAGTTTATAAGCTAGCTTCCAAAATATGTCTAATCACTGAGATTAATGTGCAGCCATTCAAAGCATATTTTCAGCCAGGCCTCCCTATATATTCAGCAAAAGCTGTCCGATTCCGAATGGGCCGTCCAAAATACCCGACAGAGTTAGAGAGTGTTGAAGTTGATGATATTATTGCTAATCACATGTTTGGGGGTAATCTATGGACATATACATCACCTGAATTTCCAATGTTGCAAGAAAACTGCTTGCAGAAATTCAAGCTACCTGAACCTGTTCTGTGCATTGGAGGTGTGCTTCAAGTTGAGCTGCTGGGCAGAGTTCAAAAACAAGAAATAGATCAATTATTTTACATATGCATCTCTCATGTTCAAGTCGTCGGATGGCCACTTTTGCCAGCATTTGATGTCAAAATACACCATCCATCAGGAAAGTGTACATTGAAGTACTGCCCTCAAACAGATTGTTGTATGTCTCCAACAAGAAGAGGCGACTCTAGCAGTCCTTCACGACTGCGGAATTTTACCACAAGTATAATGCAGAGGGGCGTGAGACGTTGGGAGCAAATTCTTATTGCTGCACTGCTTGGTCCTGGTGCTGTTGTAGTTGATGAATGA 1101 0.4187 MSEVKNKLDLLQWLGPDMSIKVLTHLDDPCDLVRVSTLSRSWHQFVIENGLCKHLCLKMFPELSGVGHVIEVENMIEPVSNMLGSSSNWECLKRNHKVYAFLACGLTPSISKNCISDAISASSTDNYPEESVLNTLDPRDRTDFRASYWSSKGESDPSVPETLVYKLASKICLITEINVQPFKAYFQPGLPIYSAKAVRFRMGRPKYPTELESVEVDDIIANHMFGGNLWTYTSPEFPMLQENCLQKFKLPEPVLCIGGVLQVELLGRVQKQEIDQLFYICISHVQVVGWPLLPAFDVKIHHPSGKCTLKYCPQTDCCMSPTRRGDSSSPSRLRNFTTSIMQRGVRRWEQILIAALLGPGAVVVDE* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3060 366 Gene3D - 1 100 - -
Ahy5g3060 366 SUPERFAMILY F-box domain 7 67 IPR036047 GO:0005515
Ahy5g3060 366 PANTHER F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED 6 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3060 Ahy-Chr5 112281473 112284481 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3060 - - gmx:100786763 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3470 15 157420013 157423001 Ahy5g3060 5 112281473 112284481 hybridization