Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3055 ATGTGTCAGGTAACAACATCTCATGATCTCAACTCTCCAAACATGAACACCAACACATTGACACTACCATTGATCTCCAAAGGAGCAGCAGAAGAAGAAGAATCTCAATCTGAATCAGAATCAGATAATAGTAACATCTCAGAGTCATTAAAGGAATTAATATCAATATCAAAGATAGCATTTCCAATGATACTGACAGGGCTATTACTGTATTGCCGTTCAATGATCTCCATGCTGTTCTTAGGACAACTTGGGGAGCTAGCCTTAGCAGGAGGCTCACTAGCACTGGGCTTCGCCAACATCACCGGCTACTCGATCCTCTCCGGCCTAGCCGTGGGAATGGAACCCATCTGTGGACAAGCCTTTGGTGCCAAGAAATTCAGGCTTTTAGGCCTATCCTTACAAAGAACCATTCTCTTGCTTCTCTTGACTTCAATCCCAATATCACTCCTCTGGCTCCACATGAAGCAAATCCTTCTTCTTTGTAACCAAGATGAGGCCATAGCCATAGAAGCACAATCATATCTTCTCTTCTCAATCCCTGACCTCATAGCACAGTCTTTTCTTCACCCTTTGAGGATTTATCTCAGAACACAGTCAATTACTCTGCCTCTAACACTCTGTGCCACTTTCTCTATTCTCCTCCACATACCAATCAACTATCTCCTTGTTTCTCACCTCAACCTTGGAATCAAGGGCGTTGCGCTTAGTGGGGTGTGGACAAATTTCAACCTTGTTGCTTCTTTGCTTCTCTATATAGTCCTCTCAGGAACTCACTCCAAGACATGGGGTGGATTCTCTTCTGAGTGCTTCACAAAATGGAAGCAGCTCTTGAATTTGGCAATCCCAAGCTGCATTTCTGTGTGCCTTGAATGGTGGTGGTACGAGATCATGATCTTGCTGTGTGGTCTGTTATTGAATCCAAGAGCAACCGTAGCTTCAATGGGGATTCTCATCCAAACAACATCGCTGCTCTACATTTTTCCATCTTCTCTGAGCTTCAGTGTTTCCACAAGGGTAGGGAACAAGCTAGGAGCACAAGAGCCTTCAAAGGCGAAACTTTCGGCCATTGTAGGACTCTCTTGCAGCTTCATTTCCGGTGTATCAGCACTGGCTTTTGCTCTAACTGTTAGGAACATGTGGGCAAGCATGTTCACAAGGGACAAAGAGATTATAGCATTGACATCAATGGTGTTACCAATTATAGGTCTTTGTGAACTTGGTAACTGTCCTCAAACCACAGGTTGTGGTGTTCTTAGAGGGACAGCAAGGCCTAAAACAGGTGCTAACATCAACTTGGGTTGCTTCTATCTTGTGGGAATGCCTGTGGCAATTTGGTTAGGCTTCTTTGCTGGCTTTGATTTTCAAGGTTTGTGGCTTGGCCTACTTGCTGCTCAAGGCTCTTGTGCTGTGTCCATGTTGGTTGTTCTTCTTAGAACTGATTGGGATTTAGAAGCTCAAAGGGCTAAGAAATTAACAGCTTCATCACCATCTGTTGGAGGAGTTTGCAATGATGATGATGATAAGAACAAAGATGTTTATCATCATCATTATGATGCAGACAACAAGTTACCCAAACCTCAAAGCAAGGAAGATTCTTTCTCATCTAATAATTCAGATGAACACCAACACTCTTATTGGGTTTAA 1647 0.4335 MCQVTTSHDLNSPNMNTNTLTLPLISKGAAEEEESQSESESDNSNISESLKELISISKIAFPMILTGLLLYCRSMISMLFLGQLGELALAGGSLALGFANITGYSILSGLAVGMEPICGQAFGAKKFRLLGLSLQRTILLLLLTSIPISLLWLHMKQILLLCNQDEAIAIEAQSYLLFSIPDLIAQSFLHPLRIYLRTQSITLPLTLCATFSILLHIPINYLLVSHLNLGIKGVALSGVWTNFNLVASLLLYIVLSGTHSKTWGGFSSECFTKWKQLLNLAIPSCISVCLEWWWYEIMILLCGLLLNPRATVASMGILIQTTSLLYIFPSSLSFSVSTRVGNKLGAQEPSKAKLSAIVGLSCSFISGVSALAFALTVRNMWASMFTRDKEIIALTSMVLPIIGLCELGNCPQTTGCGVLRGTARPKTGANINLGCFYLVGMPVAIWLGFFAGFDFQGLWLGLLAAQGSCAVSMLVVLLRTDWDLEAQRAKKLTASSPSVGGVCNDDDDKNKDVYHHHYDADNKLPKPQSKEDSFSSNNSDEHQHSYWV* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3055 548 TIGRFAM matE: MATE efflux family protein 62 459 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy5g3055 548 MobiDBLite consensus disorder prediction 529 548 - -
Ahy5g3055 548 PANTHER PROTEIN DETOXIFICATION 36 506 - -
Ahy5g3055 548 CDD MATE_eukaryotic 52 488 IPR045069 GO:0042910|GO:1990961
Ahy5g3055 548 PANTHER MULTIDRUG RESISTANCE PROTEIN 36 506 - -
Ahy5g3055 548 MobiDBLite consensus disorder prediction 504 528 - -
Ahy5g3055 548 MobiDBLite consensus disorder prediction 495 548 - -
Ahy5g3055 548 Pfam MatE 62 222 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy5g3055 548 Pfam MatE 283 445 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3055 Ahy-Chr5 112205251 112207563 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3055 K03327 - gmx:100788027 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3465 15 157338497 157340958 Ahy5g3055 5 112205251 112207563 hybridization