Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2600 ATGGCTTCCACCGCCAGAACGCTAGCACACCTCCGTCGTAGCTCCGCTGCCGCCACTAGTAGCAGAGGGAGCTACGCTTACTTCCTCATATCCAAGCCGTTTACTTCCGCCGCCGCTTCCGCTGCATCATCTGATTCCGACCAAACACTCTCTTCCTCTTCGGGATCAAAGGGATCTAGATGGTTGCTGTTTCTACCTGGAGCAATCACTTTTGGCCTTGGGACTTGGCAGATTTTTAGGAGACAAGATAAAATTAAATTGTTGGAATATAGAGAGAAGAGGCTGGAAATGGAACCTTTACAATTCCACAGTTATCCTTCAACTCAGGAATTGGACACTCTGGAATTTAGGAAGGTGGTATGCAAAGGAGTTTTTGATGATAAAAAATCAATCTTTGTAGGACCCCGCTCAAGAAGCATTTCAGGAGTTACTGAAAATGGCTACTATGTTATAACACCTCTTATGCCAGTTGAGAATCATCCAGACAGTGTCACTTTTCCCATTCTTGTTAACAGAGGATGGGTTCCTCGTAGTTGGAAAGACAAATTTGTAGAGGCTACACTAGATGAAAAGTTCCCGAATGCAGTTCCTTCTCCTTCACAGGATGATGGAACTACATCTTGGAGGAGGTTTTGGTCTAAAAAGCCCATCGTTGCGGAGGATCACACCCCTTCTGTTACACCGAAAGAAGTAGTTGGCATAGTTCGTGGAAGTGAAAAACCAAGCATATTTGTCCCGGCAAATGATCCTGAATCTTCCCAGTGGTTCTATGTCGATGTTCCTGCCATTGCGCGTGCTTGTGGTCTTCCTGAAAATACTATCTATATTGAAGATGCTAATGAAAATGTGAATCCAAGTAATCCTTACCCTATTCCCAAGGATGTCAATACCTTAATTCGAAGTTCAGTAATGCCTCAAGACCACCTGAACTACACATTGACATGGTATTCTCTTTCTGCAGCAGTTACTTTTATGGCTTTTAAGAGGCTCAGACCAAGAAAAAAGCAAAGATAG 1014 0.4369 MASTARTLAHLRRSSAAATSSRGSYAYFLISKPFTSAAASAASSDSDQTLSSSSGSKGSRWLLFLPGAITFGLGTWQIFRRQDKIKLLEYREKRLEMEPLQFHSYPSTQELDTLEFRKVVCKGVFDDKKSIFVGPRSRSISGVTENGYYVITPLMPVENHPDSVTFPILVNRGWVPRSWKDKFVEATLDEKFPNAVPSPSQDDGTTSWRRFWSKKPIVAEDHTPSVTPKEVVGIVRGSEKPSIFVPANDPESSQWFYVDVPAIARACGLPENTIYIEDANENVNPSNPYPIPKDVNTLIRSSVMPQDHLNYTLTWYSLSAAVTFMAFKRLRPRKKQR* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2600 337 ProSiteProfiles SURF1 family profile. 57 334 IPR002994 GO:0016020
Ahy5g2600 337 PANTHER SURF1-LIKE PROTEIN 15 337 - -
Ahy5g2600 337 CDD SURF1 70 325 IPR002994 GO:0016020
Ahy5g2600 337 Pfam SURF1 family 64 320 IPR002994 GO:0016020
Ahy5g2600 337 PANTHER SURFEIT LOCUS PROTEIN 15 337 IPR045214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2600 Ahy-Chr5 102140956 102145181 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2600 K14998 - gmx:100776773 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2599 15 141400434 141404627 Ahy5g2600 5 102140956 102145181 hybridization