Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2497 ATGTATAATAATCACAACTCCATTACTTGTAAATACCAAAACCAATCTTCTCACTTCATCATTCATCATTGCCAAATGACAATGATGAAGAAGAATAACAAGGAACAACAACAACAACATTTGAATAATACTTGTTCTCACCAACAACTCTATCTCCTAAACTTCTTCTCCTATGTTCTTGTCTTTGGCTTTGGCTTACTCATTGGAATCACTCTCACTTTATCCCTCAAAACCACTTTCAATTTCTCCCTCAGAAACATTACTTTCCAACTCCAACACTCTCTTCCTCCTCCTCCTCCTCAAATCTCAACCAACAAGCTTTCCATGAATTCATCATCATTGGTGATCAATAATAATACTAACAAAAGGGTAGTCAATAACACAACAAGAATTGGTTTGAGGGAGTTCTTGAAGGCACCAAGAGAGGCCATGCATGACATGAGTGAAGAAGAGTTGTTGTGGAGAGCATCAATTGCTCCCAAAATCCATAAGACACCGTTCAATTACACACCAAAGGTTGCATTCATGTTCTTGACAAAAGGGCCTTTGCCATTGGCTCCTCTTTGGGAAAGATTCTTCAAAGGCATCAATCAACAATTCTACTCTATCTATGTTCATCCTTTACCTTCTTTCAATGGAACATTCAACCAAACCCCTGTTTTTCATGGCCGAACAATCCCCAGCAAGGAGGTAAAATGGGGTGAAAATAGCATGATAGAGGCAGAGAGACGCCTACTAGCAAATGCACTTCTTGATTTCTCCAACCAAAGATTTGTTCTTCTTTCAGAGTCATGCATTCCTCTCTTCAATTTCTCAACCATATACACATACCTCATCAACACACCTCAAACCTTTGTGGAGGCCTATGATGATCCAAGTGATGTAGGCCGTGGAAGATATAGCCCAAAAATGAGGCCACAAATTAGGCTTTCCCAATGGAGGAAAGGCTCCCAATGGTTCCAAATCGACCGTGCCCTCGCCGTTGACATGGTCGCCGACCGCCAGTACTTCCCGGTGTTTCAAAAGTTTTGCAAGCCTCAATGCTACAGTGATGAACATTACTTGCCCACAATGGTTAGTATCAGATTTTGGAGGAAGAACTCTAATAGGACATTAACAAAGGTTGATTGGTCAAGGGGTGGACCTCATCCATCAAGGTACATAAGGTTTGATGTCACTATTGATTTTTTGGAGAAATTAAGGTATGGAACTACATGTTTGTACAATGGAAAGATCACCAATGTTTGTCATTTGTTTGCAAGGAAGTTCACCCTTCATGCTTTGGATAGATTGTTGAGGTTTGCTCCAAAGATAATGCAATTCAATTGA 1329 0.4026 MYNNHNSITCKYQNQSSHFIIHHCQMTMMKKNNKEQQQQHLNNTCSHQQLYLLNFFSYVLVFGFGLLIGITLTLSLKTTFNFSLRNITFQLQHSLPPPPPQISTNKLSMNSSSLVINNNTNKRVVNNTTRIGLREFLKAPREAMHDMSEEELLWRASIAPKIHKTPFNYTPKVAFMFLTKGPLPLAPLWERFFKGINQQFYSIYVHPLPSFNGTFNQTPVFHGRTIPSKEVKWGENSMIEAERRLLANALLDFSNQRFVLLSESCIPLFNFSTIYTYLINTPQTFVEAYDDPSDVGRGRYSPKMRPQIRLSQWRKGSQWFQIDRALAVDMVADRQYFPVFQKFCKPQCYSDEHYLPTMVSIRFWRKNSNRTLTKVDWSRGGPHPSRYIRFDVTIDFLEKLRYGTTCLYNGKITNVCHLFARKFTLHALDRLLRFAPKIMQFN* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2497 442 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 35 441 IPR044174 GO:0016757
Ahy5g2497 442 Pfam Core-2/I-Branching enzyme 173 400 IPR003406 GO:0016020|GO:0016757
Ahy5g2497 442 PANTHER CORE-2/I-BRANCHING ENZYME 35 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2497 Ahy-Chr5 99960948 99966867 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2497 - - gmx:100791882 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2762 15 144974391 144979475 Ahy5g2497 5 99960948 99966867 hybridization
Ahy13g2129 13 39801220 39803637 Ahy5g2497 5 99960948 99966867 PCT
Ahy3g1833 3 37856896 37859390 Ahy5g2497 5 99960948 99966867 PCT
Ahy5g2497 5 99960948 99966867 Ahy13g2129 13 39801220 39803637 PCT
Ahy5g2497 5 99960948 99966867 Ahy3g1833 3 37856896 37859390 PCT