Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2477 ATGGCGTTCGCAGCCACCACGACGGCAACTACTAACCTCTCTGAATTGCACCTCAAAACTTGTTCACCTTCATCACTCTCACTCACTTCTCCTCATTCTTCATCTTCCTCCTCAACGCTCTTCTTCTTTCGCTCTAAACCCCCATTCCGCACTCTTACACTCACACCCTTCTCTTCTCTTAGAACCTCACAACAACATACAAAACAGAATAACCGTTCTTCTTCCACAACAAAACCTAACACCAACACCAGCACCAGCACCAGCAACCCTTCTGCCCCATGGCTCGCAAAAACCCCTCCCCCCAATAATTCCTCCAAAAGGGTCACCGAATCTCACACCAACGACCCACTTCATGATACAACGGAAAATCGTTACTTTGACGGTGATAAGGGGCAAAACGCGGTTGAGAGGATCGTTCTTCGGTTGAGGAACCTAGGATTGGCTTCAGATGATGATGACGAAGAAGAAGAAGAAGAAGAAGGAAAAGAAGAGGTCTCAATTGGTGGTGTTGGTGATGATTTTCCGGTGACCGGAGAAGAGAGGCTTGGTGAGCTTCTGAGAAGGGAATGGATTAGGCCTGATGTTATTGTACGTGAAGATGATGGTGTTGGTGATGATGAGATGGTCTTTTTGCCATGGCAGAGAGAAGTGGAAGAGAGAGAGATGGGTGCTGCTAAAGAGGGAGGGGAGAAAGGGATGAGGGATAAGAGGAGGGTAAAGGCTCCAACTTTGGCGGAGCTGACGCTTGAGGACGAGGTTTTGAGGAGGTTAAGGAGGGAAGGAATGCGTACTAGGGAGAGGGTTAATGTCCCTAAAGCTGGGCTCACCAAGGAGGTTATGGAGAAGATTCACGAGAGGTGGAGGAAGGAGGAGCTTGTGAGGCTCAAATTTCATGAGGACCTTGCAAGGGACATGAGAACTGCTCATGAGATTGTTGAGCGCCGAACAGGAGGGTTGGTCACATGGAGGGCAGGTAGTGTTATGATGGTTTATCGTGGTGCTAATTACCAAGGGCCTTCATCTGGGGTTCAACACAATGCAAAAGAAGGTGATGCTTTTTTTGTACCGGATGTCTCCTCGAGAACAAAAGACAGTGATGCAGCCTCATCATCGGAGAAGAGTGAGCCTATTGTGTGGAATCGAGTACAGCCTGAAAACATGACAGAGGAGGAAGCGGAGTACAATGCCCTGCTTGATAGTTTAGGTCCTCGTTTCATTGAATGGTGGGGTACAGGAATACTTCCTGTTGATGCTGATTCACTTCCCCCTACAGTTCCAGGTTACAAAACACCCTTTAGGCTTCTTCCTACTGGAATGCGTTCTCGACTAACAAATGCGGAAATGACCAATTTAAGGAAACTTGCCAAGACACTTCCTTGTCATTTTGCCTTAGGGAGAAATAGACGTCACCAAGGCCTAGCTTGTGCTATTCTTAAGCTTTGGGAGAAAAGTTTAATTGCAAAGATTGCTGTAAAACGTGGTATCCAGAACACAAACAATGAACTGATGGCTGAGGAGATAAAGACATTGACCGGAGGTACCTTGCTGCTACGGAATAAATATTACATTGTTATATATCGTGGGAAGGACTTTGTCCCGACAGCTGTAGCTACAGTCCTAGCTGAAAGACAGGAATTGACCAAACAGGTACAAGATGTTGAAGACAAGTTCCGGTCTGGTGTTCTTGATGCTACTCCATCAGGGAAAGATGAATCAGCAACACCACGAGCAGGATCTTTAGCAGAGTTCTATGAAGCTCAGGCACGCTGGGGAAGGGATATATCTACTGAAGAACGGGAGAGGATGATGGAGGAAGCTGCCAAATCCAAGCAAGTCAGGCTAGTCAGACATATCGAACATAAATTAGCTACCGCTGAGGCAAAAAAACTTAGGGCAGAAAGGCTGTTAGCAAAAATAGAAGCATCTATGGTTCCAGCTGGTCCTGATTATGACCAGGAGACAATCACAGATGAAGAACGTGTTGTGTTCCGTCGAATTGGTTTAAGAATGAAGGCATATTTACCACTTGGTATTCGTGGTGTTTTTGATGGTGTCGTTGAGAACATGCATTTGCATTGGAAACATCGGGAGCTTGTAAAATTGATATCAAAACAGAAGACCCTTGCTTTTGTTGAAGATACAGCAAGGTTACTGGAATTTGAAAGTGGTGGAATCCTAGTGGCAATAGAGAGAGTTCCCAAAGGATTTGCTCTTATTTACTATCGTGGAAAGAATTATAAGAGGCCCATCATTCTGAGGCCTAAAAACTTACTGACAAAGCAAAAAGCATTGAAGAGATCGGTGGCTATGCAACGGCATGAGGCTCTTAGTCAGCATATTACTGAGTTGGAGAAAACCATAGAACAAATGAAAACAGAACTTGGAATGCCTCAAGATCTGGAAGATGAAGATATGCCAAACATAGAGGACCATAACCAAATAGACAATAGCTCGGAATTCAGCCAAAGCGAAGATGAAAATTTTGATGGTTTGGATGATTATGATGACAATGAACATGAAGATGATGATTCTGATGAGGAGCAAGACATTGATTGGGAAGATGAGGATGACTCTGAGTTTTCTAAATTAGAAAATGGTGAACATCCTTGA 2610 0.4479 MAFAATTTATTNLSELHLKTCSPSSLSLTSPHSSSSSSTLFFFRSKPPFRTLTLTPFSSLRTSQQHTKQNNRSSSTTKPNTNTSTSTSNPSAPWLAKTPPPNNSSKRVTESHTNDPLHDTTENRYFDGDKGQNAVERIVLRLRNLGLASDDDDEEEEEEEGKEEVSIGGVGDDFPVTGEERLGELLRREWIRPDVIVREDDGVGDDEMVFLPWQREVEEREMGAAKEGGEKGMRDKRRVKAPTLAELTLEDEVLRRLRREGMRTRERVNVPKAGLTKEVMEKIHERWRKEELVRLKFHEDLARDMRTAHEIVERRTGGLVTWRAGSVMMVYRGANYQGPSSGVQHNAKEGDAFFVPDVSSRTKDSDAASSSEKSEPIVWNRVQPENMTEEEAEYNALLDSLGPRFIEWWGTGILPVDADSLPPTVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLAKTLPCHFALGRNRRHQGLACAILKLWEKSLIAKIAVKRGIQNTNNELMAEEIKTLTGGTLLLRNKYYIVIYRGKDFVPTAVATVLAERQELTKQVQDVEDKFRSGVLDATPSGKDESATPRAGSLAEFYEAQARWGRDISTEERERMMEEAAKSKQVRLVRHIEHKLATAEAKKLRAERLLAKIEASMVPAGPDYDQETITDEERVVFRRIGLRMKAYLPLGIRGVFDGVVENMHLHWKHRELVKLISKQKTLAFVEDTARLLEFESGGILVAIERVPKGFALIYYRGKNYKRPIILRPKNLLTKQKALKRSVAMQRHEALSQHITELEKTIEQMKTELGMPQDLEDEDMPNIEDHNQIDNSSEFSQSEDENFDGLDDYDDNEHEDDDSDEEQDIDWEDEDDSEFSKLENGEHP* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2477 869 ProSiteProfiles CRM domain profile. 247 343 IPR001890 GO:0003723
Ahy5g2477 869 ProSiteProfiles CRM domain profile. 653 753 IPR001890 GO:0003723
Ahy5g2477 869 MobiDBLite consensus disorder prediction 148 176 - -
Ahy5g2477 869 Coils Coil 773 793 - -
Ahy5g2477 869 MobiDBLite consensus disorder prediction 149 163 - -
Ahy5g2477 869 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 9 865 IPR045278 GO:0000375|GO:0003729
Ahy5g2477 869 Coils Coil 615 642 - -
Ahy5g2477 869 Coils Coil 536 556 - -
Ahy5g2477 869 SMART CRS1_YhbY_2 249 332 IPR001890 GO:0003723
Ahy5g2477 869 SMART CRS1_YhbY_2 443 527 IPR001890 GO:0003723
Ahy5g2477 869 SMART CRS1_YhbY_2 655 742 IPR001890 GO:0003723
Ahy5g2477 869 SUPERFAMILY YhbY-like 654 752 IPR035920 -
Ahy5g2477 869 MobiDBLite consensus disorder prediction 799 869 - -
Ahy5g2477 869 MobiDBLite consensus disorder prediction 111 130 - -
Ahy5g2477 869 MobiDBLite consensus disorder prediction 825 860 - -
Ahy5g2477 869 ProSiteProfiles CRM domain profile. 441 538 IPR001890 GO:0003723
Ahy5g2477 869 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 9 865 - -
Ahy5g2477 869 MobiDBLite consensus disorder prediction 56 130 - -
Ahy5g2477 869 Pfam CRS1 / YhbY (CRM) domain 443 527 IPR001890 GO:0003723
Ahy5g2477 869 Pfam CRS1 / YhbY (CRM) domain 656 731 IPR001890 GO:0003723
Ahy5g2477 869 Pfam CRS1 / YhbY (CRM) domain 250 332 IPR001890 GO:0003723
Ahy5g2477 869 MobiDBLite consensus disorder prediction 56 110 - -
Ahy5g2477 869 Gene3D - 247 346 IPR035920 -
Ahy5g2477 869 Gene3D - 654 756 IPR035920 -
Ahy5g2477 869 Gene3D - 442 535 IPR035920 -
Ahy5g2477 869 SUPERFAMILY YhbY-like 443 534 IPR035920 -
Ahy5g2477 869 SUPERFAMILY YhbY-like 248 339 IPR035920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2477 Ahy-Chr5 99621500 99627486 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2477 - - ahf:112802226 1534.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2781 15 145340568 145346232 Ahy5g2477 5 99621500 99627486 hybridization