Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2452 ATGGCGGCTATGGTGGATCAACCTCTGTATCCGATCGCGGTTCTCATCGACGAGCTGAAGAACGAGGACATTCAGCTGAGGCTGAACTCGATCCGGAGGCTCTCGACGATCGCGCGCGCTCTCGGTGAGGAGAGGACCAGGAAGGAGCTGATCCCTTTCCTCAGCGAGAACAATGACGACGACGATGAGGTCCTCCTCGCCATGGCCGAGGAGCTTGGCGTCTTCGTACCCTACGTCGGAGGCGTGGAGTACGCCAACGTCCTGTTGCCACCGTTGGAAACCCTATGCACCGTTGAGGAAACTTGTGTTAGGGACAAATCTGTGGAGTCTCTGTGTAGGATTGGTGCTCAGATGAAGGAACAACACTTGGTTGAGCACTTCATTCCTTTAGTTAAGAGGTTGGCTGCTGGTGAGTGGTTCACAGCACGAGTTTCCTCGTGTGGCTTGTTTCATATTGCTTACCCTAGTGCACCGGAGGCAATGAAAACTGAACTGAGGACAATATATGGTCAGCTGTGTCAAGATGATATGCCAATGGTTAGGAGATCTGCTGCCACAAACCTTGGAAAGTTTGCTGCCACTGTTGAACCTGCTCACTTGAAAACAGATATCATGTCTGTATTTGAGGACCTCACACATGATGATCAAGATTCAGTTCGGCTACTTGCTGTTGAGGGCTGTGCAGCTCTTGGGAAATTGTTGGAGCTTCAAGATTGTGTTGCACATATTCTTCCTGTGATAGTCAATTTCTCTCAGGATAAGTCATGGCGTGTGCGTTACATGGTTGCTAATCAATTATATGAGCTATGTGAAGCTGTTGGTCCTGAACCCACCAGGTCAGAGTTGGTTCCTGCATATGTGCGCTTACTGCGTGATAATGAGGCTGAAGTACGTATTGCTGCTGCTGGAAAAGTGACTAAATTTTCCCGAATATTAAGTCCTGAACTTGCCATTCAGCATATTCTACCTTGTGTGAAGGAGTTATCGACAGATTCAAGTCAACATGTTCGCTCTGCCTTGGCTTCCGTTATAATGGGAATGGCACCAGTGTTAGGGAAGGATGCAACAATTGAGCAACTTCTTCCTATCTTCCTTTCTCTTTTGAAAGATGAGTTTCCTGATGTTAGGTTAAACATTATTAGCAAGCTTGATCAAGTGAACCAGGTTATCGGTATTGACCTGTTATCTCAATCCCTGTTGCCAGCTATCGTTGAACTCGCTGAGGATCGGCACTGGAGAGTTCGACTTGCAATCATAGAATATATACCCTTACTAGCAAGTCAGCTGGGTGTAGGCTTTTTTGATGATAAGCTTGGAGCTCTTTGCATGCAGTGGCTAAAGGACAAGGTATATTCAATTCGTGATGCAGCTGCTAATAATGTAAAACGCTTAGCAGAAGAATTTGGACCAGAGTGGGCAATGCAGCATATCATTCCCCAGGTTTTGGACATGATTAATGATCCGCATTATCTGTATCGGATGACTATTCTGCATGCTATTTCACTCCTAGCTCCTGTTCTAGGCACAGAAATCACTACTTCAAAACTTCTTCCCCTGGTCATTAATGCATCTAAAGATAGGGTACCCAATATCAAATTCAATGTAGCTAAAGTGTTGCAATCTCTCATTCCAATTGTTGATGAGTCGGTTGCTGAGAGCACCATCCGTCCCTGTTTGGTTGAGCTCAGTGAGGATCCAGATGTTGATGTGAGGTTTTTCGCCTCTCAAGCATTGCAATCTAATGATCAAGTCCAGATGTCCAGCTAG 1767 0.4607 MAAMVDQPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDDDEVLLAMAEELGVFVPYVGGVEYANVLLPPLETLCTVEETCVRDKSVESLCRIGAQMKEQHLVEHFIPLVKRLAAGEWFTARVSSCGLFHIAYPSAPEAMKTELRTIYGQLCQDDMPMVRRSAATNLGKFAATVEPAHLKTDIMSVFEDLTHDDQDSVRLLAVEGCAALGKLLELQDCVAHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRSELVPAYVRLLRDNEAEVRIAAAGKVTKFSRILSPELAIQHILPCVKELSTDSSQHVRSALASVIMGMAPVLGKDATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLKDKVYSIRDAAANNVKRLAEEFGPEWAMQHIIPQVLDMINDPHYLYRMTILHAISLLAPVLGTEITTSKLLPLVINASKDRVPNIKFNVAKVLQSLIPIVDESVAESTIRPCLVELSEDPDVDVRFFASQALQSNDQVQMSS* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2452 588 ProSiteProfiles HEAT repeat profile. 321 359 IPR021133 -
Ahy5g2452 588 ProSiteProfiles HEAT repeat profile. 165 203 IPR021133 -
Ahy5g2452 588 ProSiteProfiles HEAT repeat profile. 555 588 IPR021133 -
Ahy5g2452 588 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 3 588 - -
Ahy5g2452 588 ProSiteProfiles HEAT repeat profile. 477 515 IPR021133 -
Ahy5g2452 588 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT A 3 588 - -
Ahy5g2452 588 ProSiteProfiles HEAT repeat profile. 204 242 IPR021133 -
Ahy5g2452 588 Pfam HEAT repeat 243 271 IPR000357 GO:0005515
Ahy5g2452 588 SUPERFAMILY ARM repeat 9 580 IPR016024 -
Ahy5g2452 588 ProSiteProfiles HEAT repeat profile. 243 281 IPR021133 -
Ahy5g2452 588 ProSiteProfiles HEAT repeat profile. 516 554 IPR021133 -
Ahy5g2452 588 ProSiteProfiles HEAT repeat profile. 282 320 IPR021133 -
Ahy5g2452 588 Gene3D - 2 580 IPR011989 -
Ahy5g2452 588 ProSiteProfiles HEAT repeat profile. 360 398 IPR021133 -
Ahy5g2452 588 ProSiteProfiles HEAT repeat profile. 11 49 IPR021133 -
Ahy5g2452 588 ProSiteProfiles HEAT repeat profile. 399 437 IPR021133 -
Ahy5g2452 588 Pfam HEAT repeats 362 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2452 Ahy-Chr5 98990460 98997311 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2452 K03456 - gmx:100799440 1097.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2819 15 146166340 146173062 Ahy5g2452 5 98990460 98997311 hybridization