Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1883 ATGACCCGAACCCGAGAACCCGAATCCAAATCCAAAACCTCTTCGCCTTCTTCATCTTCGACAGGGATGAAGCTAATCGTTCCGCTGCAAGGCGTGGTTCAAGGTCGCGGTGGAATCTTGTTAGGGTCGTTAATCCCGTGTGCGCTGTTCTACTTCTTCCAGCTGTACCTCAAGAAACGACGTCGTTCCAACGACAAACACCCCTCCTCCAACCCTCCTTCGCCTTCTTCCTCGTTTCCGGAGCTGCCGCGCACGCCGTCGCGCTCCAACCTCTCGTCCAGGGGATCCCTCACCGGCGTGCGCCTCTCCAGGCTCGCCACTACCATCTCCGACGACGATTCAGCTTACTACGTTGGCCTCAACAGAGCCTCACGTGATCCCTATCACAAGCTCACCAACCCCGATGGAATCATCCAGCTTGGTTTGTCCGATAACACGTTGAGTTTGGATTTGATTGGGGATTGGATGCGGAAGTGGGGCAGTGGTGGTGACGATGGTTTGAGTATTAATGGGATTGCAACGTATCAGGCATTTGATGGAGTTGACGAACTCAAACTGGCCTTGTCGGATTTTATGCATCAAGTAATGGGAGGATCGGTGCATTTTGACACATCTAATATGGTGTTAACAGCTGGTGCAACTCCTGCAATTGAGATACTATCCTTCTGCTTGGCAGACCATGGGAATGCATTCCTTGTCCCTACACCATACTATCCAGGTTTTGACAGAGATGTTAAATGGCGTCCCGGGGTAGATCTAATACCTGTTCACTGTCGCAGCGCTGACAATTTTAATCTAAGTATGACAGCTCTTGAACAGGCATATAGTCAAGCAAGAAAACGAGGAGTCAAGGTTCGCGGAATTCTTGTTTCCAACCCTTCGAATCCTGTTGGCAATATGCTGACACAGGACATGCTTTACAATCTCATAGACTTTGCCGAAGATAAAAATATTCATCTCATTGTTGATGAAGTATTTGCAGGCTCCACGTATGGAAGTGAGAAATTTGTCAGCGTAGCTGAAATTCTTGAGTCAGATTCAGAATATATAGACAACAGACGAATTCATATAATATATGGGCTGTCCAAGGACCTTGCACTAGCTGGCTTTAGAGTTGGGGTTATATATTCATTCAACAAGAATGTCTTGGCTACTGCTAGGAAGTTATGTAGATTTTCTTCTATATCTGCTCCAACTCAGAGGCTAGTTACATCAATGCTTTCGGATAAAAAATTTATTCAGGATTACTTTGAAACCAACCGGAACAGAATGCGCCAAGTACACCATGAATTTGTGGATGCTTTAAGTAAAATAGGAATTAAGTGTGCCAAGAGCAGCGGTGGTATGTTCTGTTGGGCTGATATGAGTGGATTAATCAAACCTTACAGTGAGAAAGGAGAACTTGAGCTATGGGAGAAGTTTATGAGTATTGCTAAGATCAATATTACTCCCGGATCAGCCTGCCATTGCATAGAACCCGGATGGTTTCGTATTTGTTTTACTACTATGTCTTTGGACGAGATTCCTCTAGTTATTGAACGGATTAGGAGAGTTGTTGAAGTTTGTAAATTCTCTAGTTGA 1581 0.4529 MTRTREPESKSKTSSPSSSSTGMKLIVPLQGVVQGRGGILLGSLIPCALFYFFQLYLKKRRRSNDKHPSSNPPSPSSSFPELPRTPSRSNLSSRGSLTGVRLSRLATTISDDDSAYYVGLNRASRDPYHKLTNPDGIIQLGLSDNTLSLDLIGDWMRKWGSGGDDGLSINGIATYQAFDGVDELKLALSDFMHQVMGGSVHFDTSNMVLTAGATPAIEILSFCLADHGNAFLVPTPYYPGFDRDVKWRPGVDLIPVHCRSADNFNLSMTALEQAYSQARKRGVKVRGILVSNPSNPVGNMLTQDMLYNLIDFAEDKNIHLIVDEVFAGSTYGSEKFVSVAEILESDSEYIDNRRIHIIYGLSKDLALAGFRVGVIYSFNKNVLATARKLCRFSSISAPTQRLVTSMLSDKKFIQDYFETNRNRMRQVHHEFVDALSKIGIKCAKSSGGMFCWADMSGLIKPYSEKGELELWEKFMSIAKINITPGSACHCIEPGWFRICFTTMSLDEIPLVIERIRRVVEVCKFSS* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1883 526 Gene3D - 160 409 IPR015421 GO:0003824
Ahy5g1883 526 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 15 522 - -
Ahy5g1883 526 MobiDBLite consensus disorder prediction 81 95 - -
Ahy5g1883 526 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 360 373 IPR004838 GO:0003824|GO:0009058|GO:0030170
Ahy5g1883 526 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 282 306 - -
Ahy5g1883 526 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 386 409 - -
Ahy5g1883 526 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 140 166 - -
Ahy5g1883 526 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 206 226 - -
Ahy5g1883 526 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 354 378 - -
Ahy5g1883 526 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 318 341 - -
Ahy5g1883 526 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 228 249 - -
Ahy5g1883 526 Gene3D Aspartate Aminotransferase, domain 1 126 514 IPR015422 GO:0003824
Ahy5g1883 526 PANTHER AMINOTRANSFERASE ACS12-RELATED 15 522 - -
Ahy5g1883 526 MobiDBLite consensus disorder prediction 63 95 - -
Ahy5g1883 526 CDD AAT_like 175 517 - -
Ahy5g1883 526 Pfam Aminotransferase class I and II 141 515 IPR004839 GO:0009058|GO:0030170
Ahy5g1883 526 MobiDBLite consensus disorder prediction 1 22 - -
Ahy5g1883 526 SUPERFAMILY PLP-dependent transferases 123 520 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1883 Ahy-Chr5 86982060 86985312 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1883 K14270 - gmx:100811906 796.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3402 15 156521648 156524424 Ahy5g1883 5 86982060 86985312 hybridization