Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1545 ATGGTGAAACATCGGTTGAGAGATTCTATGAAATCTTTATTTAAAAGCTACATCGACCCTGAAAAGGAAGCGCAGCTGAAAGGAGCTAAAGGAGAAATTCAAGAGAAGGTGAAAAGAATATTGAAACTTGTTAAAGATGAACATCTTGAAGAGGATGATGCTCCATTAGAACTTTCTAAGAAGGAATCACTTGTTAAATTGATAGAGGATTTCCACAGTCAATACCAATCACTCTATGCAAAGTATGATAATCTAACAGATGAGTTGAGGAAAAAGATCATTGGCAAGAAAGGAAAGGAGAGTTTTTCTTCCAGCTCAGACTCGGATTCTGATTATTCTTCAATGGACAAAGACAGCAAAAATGGACAACTGGAAAATGAATTTCAAAAGACAATTAATGGCATGAAGCAAGAACTTCGAACAGCACAGATGGAAGTTGCGGAATTAAATCAGAAGTTGACAGTGACAAGTGAAGAGAAACAGGATCTAATGAAGAAACTTGAAAGTACTGAGAATGAGTCGTCTTCTAAAATAGCAGATTTGTCATCTCAAATAAACAATCTGCTGGCCGAAATGGGTAAACTACATGCTCAGAAAACTGAAACGGAGGAAGAGATGAACAAAGCTACAGCACAAATGATGGTGCTCACTACCCAAGTTAACAACCTGCAAAGAGACTTACTATTGTTGCAGAAAGAGAAAGAAGAACGAGAAAATGCATATGAGAAGTTAAATGAAGAGTATGTGCAAGTAGATAATTGGTATAAGGAATGCAAGGCGAAACTAGAAGCGGCAGAGAAGAAGATCCAAGTAATGACAGAAGAATTTCATGAAGGCATTGGCTCAAAGGACCAGATGATAGCAGATTTGGAACAAACAACAGAAGACTTGAAAAGAGACCTTGAAGAGAAAGGAGATGAAATTAATACTTTACATGAGAATATTAGCATCCTTGAGGTTAAGCTTCGTATGTCAAACCAAAAGCTCCGGGTTGCTGATCAATTGCTAAGTGAGAAAGAGGAGGGCTTCAGGAAAGCAGAAGAGAAGTTCCATAACGATCAGAGATCACTTGAAGAGAGGATTGCCAAATTGTCAGCAACTATTGCTATTCAGGAGGATGCTTATCAGGAAATTGTGTTTGGCATTAAAGAAAGTGTGAACAGTGTGATGACTGGAACCAAAAATATTATGTGGAAATTTGAGGATGAGTGTAAAAATTATGAGAACTATATCTCAAACATGTCACATGAGCTTCACATTGCAAGGAACTTTGTCAGGGAGATGAACAAGGAAAAAGTGCAACTGAAGGAGAAAATAAACCATTTGGAGGAGCAACTACAGGATAAAAAGAAGCAGGAGTTGGATTTGAGGCAGATGGTGAAGAAGTTAGATGAAAAGGCAAGAGAGGAGGAACTAGCGAAGAAGAATCTAAGGACAAATGTTTTTCAACTTGAGAATACTATTGGAGAGCTACAAAAATTGGTGAAAGAGAAAGACCAAGGTATATTGAAGTTGGCTGAGGAGAAGAGGGAGGCCATTAGGCAGCTGTGTCTGGGAATCGATTATCATCGCAGTCGTTATAACACTCTCATGGACGTTGTATCAAGGACTCGCAGAGGCTAG 1623 0.3851 MVKHRLRDSMKSLFKSYIDPEKEAQLKGAKGEIQEKVKRILKLVKDEHLEEDDAPLELSKKESLVKLIEDFHSQYQSLYAKYDNLTDELRKKIIGKKGKESFSSSSDSDSDYSSMDKDSKNGQLENEFQKTINGMKQELRTAQMEVAELNQKLTVTSEEKQDLMKKLESTENESSSKIADLSSQINNLLAEMGKLHAQKTETEEEMNKATAQMMVLTTQVNNLQRDLLLLQKEKEERENAYEKLNEEYVQVDNWYKECKAKLEAAEKKIQVMTEEFHEGIGSKDQMIADLEQTTEDLKRDLEEKGDEINTLHENISILEVKLRMSNQKLRVADQLLSEKEEGFRKAEEKFHNDQRSLEERIAKLSATIAIQEDAYQEIVFGIKESVNSVMTGTKNIMWKFEDECKNYENYISNMSHELHIARNFVREMNKEKVQLKEKINHLEEQLQDKKKQELDLRQMVKKLDEKAREEELAKKNLRTNVFQLENTIGELQKLVKEKDQGILKLAEEKREAIRQLCLGIDYHRSRYNTLMDVVSRTRRG* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1545 540 Pfam KIP1-like protein 14 83 IPR011684 GO:0003779
Ahy5g1545 540 Coils Coil 178 250 - -
Ahy5g1545 540 MobiDBLite consensus disorder prediction 96 124 - -
Ahy5g1545 540 Gene3D - 204 385 - -
Ahy5g1545 540 MobiDBLite consensus disorder prediction 158 173 - -
Ahy5g1545 540 Coils Coil 68 88 - -
Ahy5g1545 540 Coils Coil 255 275 - -
Ahy5g1545 540 PANTHER COP1-INTERACTIVE PROTEIN 1 1 163 - -
Ahy5g1545 540 PANTHER COP1-INTERACTIVE PROTEIN 1 231 538 - -
Ahy5g1545 540 PANTHER COP1-INTERACTIVE PROTEIN 1 162 237 - -
Ahy5g1545 540 Coils Coil 425 511 - -
Ahy5g1545 540 Coils Coil 354 374 - -
Ahy5g1545 540 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 270 332 IPR000727 -
Ahy5g1545 540 Coils Coil 125 173 - -
Ahy5g1545 540 Coils Coil 283 314 - -
Ahy5g1545 540 MobiDBLite consensus disorder prediction 157 178 - -
Ahy5g1545 540 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 89 IPR011684 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1545 Ahy-Chr5 41066449 41069741 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1545 - - aip:107643113 917.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy5g1545 5 41066449 41069741 Ahy13g2737 13 102695118 102701381 PCT
Ahy5g1545 5 41066449 41069741 Ahy3g2412 3 101361049 101367367 PCT